RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 PICALMQ13492 652 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 TTF1Q15361 905 aaPredicted RBP9.68□□□□□ -0.86
SMAD1-209ENST00000511125 NIM1KQ8IY84 436 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 COA1Q9GZY4 146 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
SMAD1-209ENST00000511125 MYO5AQ9Y4I1 1855 aaKnown RBP9.68□□□□□ -0.86
SMAD1-209ENST00000511125 PSMD14O00487 310 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 IARSP41252 1262 aaKnown RBP9.67□□□□□ -0.86
SMAD1-209ENST00000511125 CHST3Q7LGC8 479 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 MINDY4BA8MYZ0 360 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 REC8O95072 547 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 KIAA2012Q0VF49 1180 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 ZMYM1Q5SVZ6 1142 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 TOMM22Q9NS69 142 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 SAP30BPQ9UHR5 308 aaKnown RBP9.67□□□□□ -0.86
SMAD1-209ENST00000511125 SLC4A4Q9Y6R1 1079 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 NRXN2Q9P2S2 1712 aa9.67□□□□□ -0.86
SMAD1-209ENST00000511125 NSUN4Q96CB9 384 aaKnown RBP9.67□□□□□ -0.86
SMAD1-209ENST00000511125 RBM8AQ9Y5S9 174 aaKnown RBP9.67□□□□□ -0.86
SMAD1-209ENST00000511125 TCP10Q12799 353 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 WDR66Q8TBY9 1149 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 APPBP2Q92624 585 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 LRRC2Q9BYS8 371 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 LSG1Q9H089 658 aaKnown RBP9.66□□□□□ -0.86
SMAD1-209ENST00000511125 MED23Q9ULK4 1368 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
SMAD1-209ENST00000511125 IL1R1P14778 569 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 CXCL9Q07325 125 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 LRP5O75197 1615 aa9.66□□□□□ -0.86
SMAD1-209ENST00000511125 CLRN2A0PK11 232 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 RRP12Q5JTH9 1297 aaKnown RBP9.65□□□□□ -0.86
SMAD1-209ENST00000511125 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 MAPKAPK5Q8IW41 473 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 RNF181Q9P0P0 153 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 CHD4Q14839 1912 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 TCRBV5S4A2TA0A5A2 114 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 SH3RF3Q8TEJ3 882 aaPredicted RBP9.65□□□□□ -0.86
SMAD1-209ENST00000511125 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMAD1-209ENST00000511125 TGFBRAP1Q8WUH2 860 aa9.65□□□□□ -0.86
SMAD1-209ENST00000511125 ZNF512BQ96KM6 892 aaPredicted RBP9.65□□□□□ -0.86
SMAD1-209ENST00000511125 HIP1O00291 1037 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 PRDM1O75626 825 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 BTDP43251 543 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 TDO2P48775 406 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 ZSCAN25Q6NSZ9 544 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 PODNQ7Z5L7 613 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 SUPT20HQ8NEM7 779 aa9.65□□□□□ -0.87
SMAD1-209ENST00000511125 ZNF526Q8TF50 670 aaPredicted RBP9.65□□□□□ -0.87
SMAD1-209ENST00000511125 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 FGAP02671 866 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 CYP2D6P10635 497 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 CC2D2BQ6DHV5 1058 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 NAP1L2Q9ULW6 460 aaPredicted RBP9.64□□□□□ -0.87
SMAD1-209ENST00000511125 AKAP11Q9UKA4 1901 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 EGFRP00533 1210 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 ANP32AP39687 249 aaKnown RBP9.64□□□□□ -0.87
SMAD1-209ENST00000511125 USP5P45974 858 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
SMAD1-209ENST00000511125 ZNRF3Q9ULT6 936 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 DACT2Q5SW24 774 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 SAMD7Q7Z3H4 446 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 RAB11FIP4Q86YS3 637 aa9.64□□□□□ -0.87
SMAD1-209ENST00000511125 RTFDC1Q9BY42 306 aaPredicted RBP9.64□□□□□ -0.87
SMAD1-209ENST00000511125 TDRD3Q9H7E2 651 aaKnown RBP9.64□□□□□ -0.87
SMAD1-209ENST00000511125 AK9Q5TCS8 1911 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 CD2BP2O95400 341 aaKnown RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 USP17L8P0C7I0 530 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 NEK4P51957 841 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 TBC1D10BQ4KMP7 808 aaPredicted RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 CREB3L3Q68CJ9 461 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 SPTY2D1Q68D10 685 aaPredicted RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 PSMD1Q99460 953 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 NOL10Q9BSC4 688 aaKnown RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 VEZTQ9HBM0 779 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 HELLSQ9NRZ9 838 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 COL4A5P29400 1685 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 QSER1Q2KHR3 1735 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 FOXP2O15409 715 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 ZFYP08048 801 aaPredicted RBP9.63□□□□□ -0.87
SMAD1-209ENST00000511125 UBE3CQ15386 1083 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 C9orf131Q5VYM1 1079 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 DLK2Q6UY11 383 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 NAPBQ9H115 298 aa9.63□□□□□ -0.87
SMAD1-209ENST00000511125 ZNF541Q9H0D2 1346 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
SMAD1-209ENST00000511125 SLC27A2O14975 620 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms