RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
DDX41-212ENST00000511040 TLL2Q9Y6L7 1015 aa17.21■□□□□ 0.35
DDX41-212ENST00000511040 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 MYO1BO43795 1136 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 PRDX5P30044 214 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 VEGFBP49765 207 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
DDX41-212ENST00000511040 TDRD3Q9H7E2 651 aaKnown RBP17.2■□□□□ 0.34
DDX41-212ENST00000511040 GBA2Q9HCG7 927 aaPredicted RBP17.2■□□□□ 0.34
DDX41-212ENST00000511040 IL1RAPL2Q9NP60 686 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
DDX41-212ENST00000511040 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
DDX41-212ENST00000511040 LDHBP07195 334 aaKnown RBP17.19■□□□□ 0.34
DDX41-212ENST00000511040 SAPCD2Q86UD0 394 aa17.19■□□□□ 0.34
DDX41-212ENST00000511040 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
DDX41-212ENST00000511040 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
DDX41-212ENST00000511040 HMG20BQ9P0W2 317 aa17.19■□□□□ 0.34
DDX41-212ENST00000511040 ZNF70Q9UC06 446 aaPredicted RBP17.19■□□□□ 0.34
DDX41-212ENST00000511040 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
DDX41-212ENST00000511040 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
DDX41-212ENST00000511040 DIXDC1Q155Q3 683 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 SPDYE2Q495Y8 402 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 CYP4F22Q6NT55 531 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 AACSQ86V21 672 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 C2orf69Q8N8R5 385 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 DBNLQ9UJU6 430 aaKnown RBP17.18■□□□□ 0.34
DDX41-212ENST00000511040 MAST3O60307 1309 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 SALL1Q9NSC2 1324 aa17.18■□□□□ 0.34
DDX41-212ENST00000511040 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 ARID4AP29374 1257 aaPredicted RBP17.17■□□□□ 0.34
DDX41-212ENST00000511040 MCAMP43121 646 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 CACNB3P54284 484 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 HUNKP57058 714 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 TBC1D9Q6ZT07 1266 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 MOB2Q70IA6 237 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 JMYQ8N9B5 988 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 SPATA5Q8NB90 893 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 RHPN1Q8TCX5 695 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 CAPNS2Q96L46 248 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
DDX41-212ENST00000511040 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
DDX41-212ENST00000511040 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
DDX41-212ENST00000511040 PRKG1Q13976 671 aa17.16■□□□□ 0.34
DDX41-212ENST00000511040 TTLL12Q14166 644 aaPredicted RBP17.16■□□□□ 0.34
DDX41-212ENST00000511040 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
DDX41-212ENST00000511040 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
DDX41-212ENST00000511040 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
DDX41-212ENST00000511040 WDR33Q9C0J8 1336 aaKnown RBP17.16■□□□□ 0.34
DDX41-212ENST00000511040 ZBTB22O15209 634 aa17.15■□□□□ 0.34
DDX41-212ENST00000511040 RASA3Q14644 834 aa17.15■□□□□ 0.34
DDX41-212ENST00000511040 HHIPL2Q6UWX4 724 aa17.15■□□□□ 0.34
DDX41-212ENST00000511040 DZIP1Q86YF9 867 aaKnown RBP17.15■□□□□ 0.34
DDX41-212ENST00000511040 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
DDX41-212ENST00000511040 DAGLAQ9Y4D2 1042 aa17.15■□□□□ 0.34
DDX41-212ENST00000511040 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
DDX41-212ENST00000511040 UBE2Q2LH0YL09 131 aa17.14■□□□□ 0.33
DDX41-212ENST00000511040 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
DDX41-212ENST00000511040 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
DDX41-212ENST00000511040 MRIQ9BWK5 157 aa17.14■□□□□ 0.33
DDX41-212ENST00000511040 FZD1Q9UP38 647 aa17.14■□□□□ 0.33
DDX41-212ENST00000511040 AOC2O75106 756 aa17.13■□□□□ 0.33
DDX41-212ENST00000511040 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
DDX41-212ENST00000511040 NF2P35240 595 aa17.13■□□□□ 0.33
DDX41-212ENST00000511040 ECE1P42892 770 aa17.13■□□□□ 0.33
DDX41-212ENST00000511040 NBPF12Q5TAG4 269 aaPredicted RBP17.13■□□□□ 0.33
DDX41-212ENST00000511040 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
DDX41-212ENST00000511040 CDAN1Q8IWY9 1227 aa17.13■□□□□ 0.33
DDX41-212ENST00000511040 PAPPA2Q9BXP8 1791 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 SMARCA5O60264 1052 aaPredicted RBP17.12■□□□□ 0.33
DDX41-212ENST00000511040 ZAP70P43403 619 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 MECOMQ03112 1051 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
DDX41-212ENST00000511040 TMEM39BQ9GZU3 492 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 TMOD2Q9NZR1 351 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 RAI14Q9P0K7 980 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
DDX41-212ENST00000511040 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
DDX41-212ENST00000511040 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 NDUFB9Q9Y6M9 179 aa17.12■□□□□ 0.33
DDX41-212ENST00000511040 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 SSC5DA1L4H1 1573 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
DDX41-212ENST00000511040 ZNF157P51786 506 aaPredicted RBP17.11■□□□□ 0.33
DDX41-212ENST00000511040 TNFAIP1Q13829 316 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 RGMBQ6NW40 437 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 ZNF384Q8TF68 577 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 USP40Q9NVE5 1235 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
DDX41-212ENST00000511040 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms