RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SSC5DA1L4H1 1573 aa28.58■■■□□ 2.17
SNF8-209ENST00000510558 SPDYE2Q495Y8 402 aa28.58■■■□□ 2.17
SNF8-209ENST00000510558 DZIP1LQ8IYY4 767 aaKnown RBP28.58■■■□□ 2.17
SNF8-209ENST00000510558 SRGAP3O43295 1099 aa28.57■■■□□ 2.16
SNF8-209ENST00000510558 MTX1Q13505 466 aa28.57■■■□□ 2.16
SNF8-209ENST00000510558 CSRNP1Q96S65 589 aa28.57■■■□□ 2.16
SNF8-209ENST00000510558 TDRD3Q9H7E2 651 aaKnown RBP28.57■■■□□ 2.16
SNF8-209ENST00000510558 ZNF70Q9UC06 446 aaPredicted RBP28.57■■■□□ 2.16
SNF8-209ENST00000510558 ANGEL1Q9UNK9 670 aaKnown RBP28.57■■■□□ 2.16
SNF8-209ENST00000510558 HDLBPQ00341 1268 aaKnown RBP28.56■■■□□ 2.16
SNF8-209ENST00000510558 GNAI2P04899 355 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 TNFAIP1Q13829 316 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 RASA3Q14644 834 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 REM2Q8IYK8 340 aaPredicted RBP28.55■■■□□ 2.16
SNF8-209ENST00000510558 TMEM57Q8N5G2 664 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 SAGE1Q9NXZ1 904 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 FZD1Q9UP38 647 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 SUGT1Q9Y2Z0 365 aa28.55■■■□□ 2.16
SNF8-209ENST00000510558 SUPT20HL1Q3ZLR7 823 aa28.54■■■□□ 2.16
SNF8-209ENST00000510558 LDLRAD1Q5T700 205 aa28.54■■■□□ 2.16
SNF8-209ENST00000510558 TEKT1Q969V4 418 aa28.54■■■□□ 2.16
SNF8-209ENST00000510558 MAST3O60307 1309 aa28.53■■■□□ 2.16
SNF8-209ENST00000510558 NBPF12Q5TAG4 269 aaPredicted RBP28.53■■■□□ 2.16
SNF8-209ENST00000510558 WDR66Q8TBY9 1149 aa28.53■■■□□ 2.16
SNF8-209ENST00000510558 RNF186Q9NXI6 227 aa28.53■■■□□ 2.16
SNF8-209ENST00000510558 PPP1R12BO60237 982 aaPredicted RBP28.52■■■□□ 2.16
SNF8-209ENST00000510558 MAP3K11Q16584 847 aa28.52■■■□□ 2.16
SNF8-209ENST00000510558 TRPA1O75762 1119 aa28.51■■■□□ 2.15
SNF8-209ENST00000510558 MRIQ9BWK5 157 aa28.51■■■□□ 2.15
SNF8-209ENST00000510558 GNL3LQ9NVN8 582 aaKnown RBP28.51■■■□□ 2.15
SNF8-209ENST00000510558 TCP10L2B9ZVM9 353 aa28.5■■■□□ 2.15
SNF8-209ENST00000510558 PHKA1P46020 1223 aa28.5■■■□□ 2.15
SNF8-209ENST00000510558 ZDHHC15Q96MV8 337 aa28.5■■■□□ 2.15
SNF8-209ENST00000510558 ADORA1P30542 326 aa28.49■■■□□ 2.15
SNF8-209ENST00000510558 MKRN3Q13064 507 aaKnown RBP28.49■■■□□ 2.15
SNF8-209ENST00000510558 OTOFQ9HC10 1997 aa28.48■■■□□ 2.15
SNF8-209ENST00000510558 PNMA6EA0A0J9YXQ4 647 aa28.48■■■□□ 2.15
SNF8-209ENST00000510558 TNNI2P48788 182 aa28.48■■■□□ 2.15
SNF8-209ENST00000510558 TFCP2Q12800 502 aa28.48■■■□□ 2.15
SNF8-209ENST00000510558 FTSJ3Q8IY81 847 aaKnown RBP28.48■■■□□ 2.15
SNF8-209ENST00000510558 SEMA3EO15041 775 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 TIMM10P62072 90 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 CCDC102BQ68D86 513 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 HHIPL2Q6UWX4 724 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 TEPSINQ96N21 525 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 DENND2AQ9ULE3 1009 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 AKAP2Q9Y2D5 859 aa28.47■■■□□ 2.15
SNF8-209ENST00000510558 SPRYD7Q5W111 196 aa28.46■■■□□ 2.15
SNF8-209ENST00000510558 APOBEC3HQ6NTF7 200 aaKnown RBP28.46■■■□□ 2.15
SNF8-209ENST00000510558 SLC10A4Q96EP9 437 aa28.46■■■□□ 2.15
SNF8-209ENST00000510558 CLMNQ96JQ2 1002 aa28.46■■■□□ 2.15
SNF8-209ENST00000510558 TMEM39BQ9GZU3 492 aa28.46■■■□□ 2.15
SNF8-209ENST00000510558 LAMB1P07942 1786 aa28.45■■■□□ 2.15
SNF8-209ENST00000510558 A0A1B0GUL7 405 aa28.45■■■□□ 2.14
SNF8-209ENST00000510558 USP2O75604 605 aaPredicted RBP28.45■■■□□ 2.14
SNF8-209ENST00000510558 IREB2P48200 963 aaKnown RBP28.45■■■□□ 2.14
SNF8-209ENST00000510558 CACNB3P54284 484 aa28.45■■■□□ 2.14
SNF8-209ENST00000510558 CDAN1Q8IWY9 1227 aa28.45■■■□□ 2.14
SNF8-209ENST00000510558 TMOD2Q9NZR1 351 aa28.45■■■□□ 2.14
SNF8-209ENST00000510558 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.45■■■□□ 2.14
SNF8-209ENST00000510558 SALL1Q9NSC2 1324 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 UNCXA6NJT0 531 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 ZBTB22O15209 634 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 RLBP1P12271 317 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 PRDX5P30044 214 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 TM4SF4P48230 202 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 ITPRIPQ8IWB1 547 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 ABHD8Q96I13 439 aa28.44■■■□□ 2.14
SNF8-209ENST00000510558 LDHBP07195 334 aaKnown RBP28.43■■■□□ 2.14
SNF8-209ENST00000510558 SREBF2Q12772 1141 aa28.43■■■□□ 2.14
SNF8-209ENST00000510558 XAGE2Q96GT9 111 aa28.43■■■□□ 2.14
SNF8-209ENST00000510558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.43■■■□□ 2.14
SNF8-209ENST00000510558 G3BP1Q13283 466 aaKnown RBP eCLIP28.42■■■□□ 2.14
SNF8-209ENST00000510558 MYH2Q9UKX2 1941 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 RASGRF1Q13972 1273 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 MVPQ14764 893 aaKnown RBP28.41■■■□□ 2.14
SNF8-209ENST00000510558 DIXDC1Q155Q3 683 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 FKBP1CQ5VVH2 108 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 ANKRD13AQ8IZ07 590 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 WNK4Q96J92 1243 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 DAGLAQ9Y4D2 1042 aa28.41■■■□□ 2.14
SNF8-209ENST00000510558 ZBTB48P10074 688 aaPredicted RBP28.4■■■□□ 2.14
SNF8-209ENST00000510558 FAM83AQ86UY5 434 aa28.4■■■□□ 2.14
SNF8-209ENST00000510558 NEUROD6Q96NK8 337 aa28.4■■■□□ 2.14
SNF8-209ENST00000510558 C1orf115Q9H7X2 142 aa28.4■■■□□ 2.14
SNF8-209ENST00000510558 POLA2Q14181 598 aa28.39■■■□□ 2.14
SNF8-209ENST00000510558 ZGPATQ8N5A5 531 aaKnown RBP28.39■■■□□ 2.14
SNF8-209ENST00000510558 MCOLN1Q9GZU1 580 aa28.39■■■□□ 2.14
SNF8-209ENST00000510558 PDS5AQ29RF7 1337 aaKnown RBP28.39■■■□□ 2.13
SNF8-209ENST00000510558 MANSC4A6NHS7 340 aaPredicted RBP28.38■■■□□ 2.13
SNF8-209ENST00000510558 ZBTB7BO15156 539 aaPredicted RBP28.38■■■□□ 2.13
SNF8-209ENST00000510558 ATP8B2P98198 1209 aa28.38■■■□□ 2.13
SNF8-209ENST00000510558 DGKZQ13574 1117 aa28.38■■■□□ 2.13
SNF8-209ENST00000510558 SSH3Q8TE77 659 aa28.38■■■□□ 2.13
SNF8-209ENST00000510558 TBC1D8O95759 1140 aa28.37■■■□□ 2.13
SNF8-209ENST00000510558 RPAP1Q9BWH6 1393 aaPredicted RBP28.37■■■□□ 2.13
SNF8-209ENST00000510558 AK9Q5TCS8 1911 aa28.36■■■□□ 2.13
SNF8-209ENST00000510558 CDC42EP5Q6NZY7 148 aa28.36■■■□□ 2.13
SNF8-209ENST00000510558 GJA5P36382 358 aa28.35■■■□□ 2.13
SNF8-209ENST00000510558 GORABQ5T7V8 394 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms