RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 PANK1Q8TE04 598 aa23.03■■□□□ 1.28
LSM6-206ENST00000510331 NF2P35240 595 aa23.02■■□□□ 1.28
LSM6-206ENST00000510331 FZD1Q9UP38 647 aa23.02■■□□□ 1.28
LSM6-206ENST00000510331 UBE2Q2LH0YL09 131 aa23.01■■□□□ 1.27
LSM6-206ENST00000510331 LBX1P52954 281 aa23.01■■□□□ 1.27
LSM6-206ENST00000510331 PRKG1Q13976 671 aa23.01■■□□□ 1.27
LSM6-206ENST00000510331 TDRD3Q9H7E2 651 aaKnown RBP23.01■■□□□ 1.27
LSM6-206ENST00000510331 ZNF70Q9UC06 446 aaPredicted RBP23.01■■□□□ 1.27
LSM6-206ENST00000510331 TSKSQ9UJT2 592 aa23.01■■□□□ 1.27
LSM6-206ENST00000510331 A0A1B0GUL7 405 aa23■■□□□ 1.27
LSM6-206ENST00000510331 CCDC102AQ96A19 550 aa23■■□□□ 1.27
LSM6-206ENST00000510331 BEGAINQ9BUH8 593 aa23■■□□□ 1.27
LSM6-206ENST00000510331 PPP2R3BQ9Y5P8 575 aa23■■□□□ 1.27
LSM6-206ENST00000510331 POLA2Q14181 598 aa22.99■■□□□ 1.27
LSM6-206ENST00000510331 CCDC102BQ68D86 513 aa22.99■■□□□ 1.27
LSM6-206ENST00000510331 TEKT1Q969V4 418 aa22.99■■□□□ 1.27
LSM6-206ENST00000510331 MAST3O60307 1309 aa22.99■■□□□ 1.27
LSM6-206ENST00000510331 AKAP11Q9UKA4 1901 aa22.98■■□□□ 1.27
LSM6-206ENST00000510331 ZBTB7BO15156 539 aaPredicted RBP22.98■■□□□ 1.27
LSM6-206ENST00000510331 TIMM10P62072 90 aa22.98■■□□□ 1.27
LSM6-206ENST00000510331 RASGRF1Q13972 1273 aa22.98■■□□□ 1.27
LSM6-206ENST00000510331 RASA3Q14644 834 aa22.98■■□□□ 1.27
LSM6-206ENST00000510331 CDAN1Q8IWY9 1227 aa22.98■■□□□ 1.27
LSM6-206ENST00000510331 WDR66Q8TBY9 1149 aa22.98■■□□□ 1.27
LSM6-206ENST00000510331 GNL3LQ9NVN8 582 aaKnown RBP22.98■■□□□ 1.27
LSM6-206ENST00000510331 PRDX5P30044 214 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 HDLBPQ00341 1268 aaKnown RBP22.97■■□□□ 1.27
LSM6-206ENST00000510331 KIF23Q02241 960 aaPredicted RBP22.97■■□□□ 1.27
LSM6-206ENST00000510331 IFFO2Q5TF58 517 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 TNS4Q8IZW8 715 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 SSH3Q8TE77 659 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 XAGE2Q96GT9 111 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 PRDM10Q9NQV6 1147 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 SUGT1Q9Y2Z0 365 aa22.97■■□□□ 1.27
LSM6-206ENST00000510331 LAMB1P07942 1786 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 MYH2Q9UKX2 1941 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 TCP10L2B9ZVM9 353 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 SEMA3EO15041 775 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 CACNB3P54284 484 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 TNFAIP1Q13829 316 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 NBPF12Q5TAG4 269 aaPredicted RBP22.96■■□□□ 1.27
LSM6-206ENST00000510331 ZDHHC15Q96MV8 337 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 ANGEL1Q9UNK9 670 aaKnown RBP22.96■■□□□ 1.27
LSM6-206ENST00000510331 AKAP2Q9Y2D5 859 aa22.96■■□□□ 1.27
LSM6-206ENST00000510331 ATP8B2P98198 1209 aa22.95■■□□□ 1.26
LSM6-206ENST00000510331 G3BP1Q13283 466 aaKnown RBP eCLIP22.95■■□□□ 1.26
LSM6-206ENST00000510331 DIXDC1Q155Q3 683 aa22.95■■□□□ 1.26
LSM6-206ENST00000510331 ARMC9Q7Z3E5 817 aa22.95■■□□□ 1.26
LSM6-206ENST00000510331 SALL1Q9NSC2 1324 aa22.95■■□□□ 1.26
LSM6-206ENST00000510331 DENND2AQ9ULE3 1009 aa22.95■■□□□ 1.26
LSM6-206ENST00000510331 MVPQ14764 893 aaKnown RBP22.94■■□□□ 1.26
LSM6-206ENST00000510331 APOBEC3HQ6NTF7 200 aaKnown RBP22.94■■□□□ 1.26
LSM6-206ENST00000510331 CEP85Q6P2H3 762 aa22.94■■□□□ 1.26
LSM6-206ENST00000510331 TMEM39BQ9GZU3 492 aa22.94■■□□□ 1.26
LSM6-206ENST00000510331 MKRN3Q13064 507 aaKnown RBP22.93■■□□□ 1.26
LSM6-206ENST00000510331 HHIPL2Q6UWX4 724 aa22.93■■□□□ 1.26
LSM6-206ENST00000510331 TEPSINQ96N21 525 aa22.93■■□□□ 1.26
LSM6-206ENST00000510331 NEUROD6Q96NK8 337 aa22.93■■□□□ 1.26
LSM6-206ENST00000510331 DAGLAQ9Y4D2 1042 aa22.93■■□□□ 1.26
LSM6-206ENST00000510331 MAST2Q6P0Q8 1798 aa22.93■■□□□ 1.26
LSM6-206ENST00000510331 PDS5AQ29RF7 1337 aaKnown RBP22.92■■□□□ 1.26
LSM6-206ENST00000510331 CA12O43570 354 aa22.92■■□□□ 1.26
LSM6-206ENST00000510331 LDHBP07195 334 aaKnown RBP22.92■■□□□ 1.26
LSM6-206ENST00000510331 OS9Q13438 667 aaPredicted RBP22.92■■□□□ 1.26
LSM6-206ENST00000510331 LDLRAD1Q5T700 205 aa22.92■■□□□ 1.26
LSM6-206ENST00000510331 CASP8AP2Q9UKL3 1982 aa22.92■■□□□ 1.26
LSM6-206ENST00000510331 ZBTB22O15209 634 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 SURF6O75683 361 aaKnown RBP22.91■■□□□ 1.26
LSM6-206ENST00000510331 MAP3K11Q16584 847 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 SUPT20HL1Q3ZLR7 823 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 PI16Q6UXB8 463 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 CLMNQ96JQ2 1002 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 MRIQ9BWK5 157 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 COG6Q9Y2V7 657 aa22.91■■□□□ 1.26
LSM6-206ENST00000510331 CSRNP1Q96S65 589 aa22.9■■□□□ 1.26
LSM6-206ENST00000510331 TMOD2Q9NZR1 351 aa22.9■■□□□ 1.26
LSM6-206ENST00000510331 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.9■■□□□ 1.26
LSM6-206ENST00000510331 DOCK2Q92608 1830 aa22.89■■□□□ 1.26
LSM6-206ENST00000510331 PPP1R12BO60237 982 aaPredicted RBP22.89■■□□□ 1.25
LSM6-206ENST00000510331 MS4A1P11836 297 aa22.89■■□□□ 1.25
LSM6-206ENST00000510331 TNNI2P48788 182 aa22.89■■□□□ 1.25
LSM6-206ENST00000510331 TNNI3KQ59H18 835 aa22.89■■□□□ 1.25
LSM6-206ENST00000510331 FPGT-TNNI3KV9GXZ4 949 aa22.89■■□□□ 1.25
LSM6-206ENST00000510331 RPAP1Q9BWH6 1393 aaPredicted RBP22.89■■□□□ 1.25
LSM6-206ENST00000510331 ARID4AP29374 1257 aaPredicted RBP22.88■■□□□ 1.25
LSM6-206ENST00000510331 GORABQ5T7V8 394 aa22.88■■□□□ 1.25
LSM6-206ENST00000510331 HMG20BQ9P0W2 317 aa22.88■■□□□ 1.25
LSM6-206ENST00000510331 ABCF2Q9UG63 623 aa22.88■■□□□ 1.25
LSM6-206ENST00000510331 NOP58Q9Y2X3 529 aaKnown RBP22.88■■□□□ 1.25
LSM6-206ENST00000510331 IREB2P48200 963 aaKnown RBP22.87■■□□□ 1.25
LSM6-206ENST00000510331 CDC42EP5Q6NZY7 148 aa22.87■■□□□ 1.25
LSM6-206ENST00000510331 DZIP1Q86YF9 867 aaKnown RBP22.87■■□□□ 1.25
LSM6-206ENST00000510331 ZGPATQ8N5A5 531 aaKnown RBP22.87■■□□□ 1.25
LSM6-206ENST00000510331 DBNDD2Q9BQY9 259 aa22.87■■□□□ 1.25
LSM6-206ENST00000510331 RNF186Q9NXI6 227 aa22.87■■□□□ 1.25
LSM6-206ENST00000510331 SAGE1Q9NXZ1 904 aa22.87■■□□□ 1.25
LSM6-206ENST00000510331 MYO5AQ9Y4I1 1855 aaKnown RBP22.87■■□□□ 1.25
LSM6-206ENST00000510331 USP2O75604 605 aaPredicted RBP22.86■■□□□ 1.25
LSM6-206ENST00000510331 MCAMP43121 646 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms