RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	SPRYD7	Q5W111	196 aa		33.27	■■■□□ 2.92
SNF8-208	ENST00000510195	SLC10A4	Q96EP9	437 aa		33.27	■■■□□ 2.92
SNF8-208	ENST00000510195	SSC5D	A1L4H1	1573 aa		33.26	■■■□□ 2.92
SNF8-208	ENST00000510195	INHBE	P58166	350 aa		33.26	■■■□□ 2.91
SNF8-208	ENST00000510195	NBPF12	Q5TAG4	269 aa	Predicted RBP	33.26	■■■□□ 2.91
SNF8-208	ENST00000510195	INTS3	Q68E01	1043 aa	Known RBP	33.26	■■■□□ 2.91
SNF8-208	ENST00000510195	TDRD3	Q9H7E2	651 aa	Known RBP	33.26	■■■□□ 2.91
SNF8-208	ENST00000510195	IREB2	P48200	963 aa	Known RBP	33.25	■■■□□ 2.91
SNF8-208	ENST00000510195	MAST3	O60307	1309 aa		33.25	■■■□□ 2.91
SNF8-208	ENST00000510195	CCDC85C	A6NKD9	419 aa		33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	ZBTB48	P10074	688 aa	Predicted RBP	33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	TNNI2	P48788	182 aa		33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	NOM1	Q5C9Z4	860 aa	Known RBP	33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	TEKT1	Q969V4	418 aa		33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	CFHR5	Q9BXR6	569 aa		33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	LRRFIP2	Q9Y608	721 aa	Known RBP	33.24	■■■□□ 2.91
SNF8-208	ENST00000510195	IPO8	O15397	1037 aa	Known RBP	33.23	■■■□□ 2.91
SNF8-208	ENST00000510195	CEP126	Q9P2H0	1117 aa		33.23	■■■□□ 2.91
SNF8-208	ENST00000510195	USP2	O75604	605 aa	Predicted RBP	33.22	■■■□□ 2.91
SNF8-208	ENST00000510195	IL15	P40933	162 aa	Predicted RBP	33.22	■■■□□ 2.91
SNF8-208	ENST00000510195	GRIK5	Q16478	980 aa		33.22	■■■□□ 2.91
SNF8-208	ENST00000510195	WDR66	Q8TBY9	1149 aa		33.22	■■■□□ 2.91
SNF8-208	ENST00000510195	FZD1	Q9UP38	647 aa		33.22	■■■□□ 2.91
SNF8-208	ENST00000510195	MANSC4	A6NHS7	340 aa	Predicted RBP	33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	ALDH1A1	P00352	501 aa		33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	GNAI3	P08754	354 aa		33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	MKRN3	Q13064	507 aa	Known RBP	33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	ANKRD13A	Q8IZ07	590 aa		33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	ZDHHC15	Q96MV8	337 aa		33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	COPRS	Q9NQ92	184 aa		33.21	■■■□□ 2.91
SNF8-208	ENST00000510195	MEIS3	Q99687	375 aa		33.2	■■■□□ 2.91
SNF8-208	ENST00000510195	SIL1	Q9H173	461 aa		33.2	■■■□□ 2.91
SNF8-208	ENST00000510195	ZBTB22	O15209	634 aa		33.19	■■■□□ 2.9
SNF8-208	ENST00000510195	HHIPL2	Q6UWX4	724 aa		33.19	■■■□□ 2.9
SNF8-208	ENST00000510195	CTU1	Q7Z7A3	348 aa	Known RBP	33.19	■■■□□ 2.9
SNF8-208	ENST00000510195	TEPSIN	Q96N21	525 aa		33.19	■■■□□ 2.9
SNF8-208	ENST00000510195	ATP2B3	Q16720	1220 aa		33.18	■■■□□ 2.9
SNF8-208	ENST00000510195	FKBP1C	Q5VVH2	108 aa		33.18	■■■□□ 2.9
SNF8-208	ENST00000510195	WNK4	Q96J92	1243 aa		33.18	■■■□□ 2.9
SNF8-208	ENST00000510195	GNL3L	Q9NVN8	582 aa	Known RBP	33.18	■■■□□ 2.9
SNF8-208	ENST00000510195	TCP10L2	B9ZVM9	353 aa		33.17	■■■□□ 2.9
SNF8-208	ENST00000510195	TBC1D8	O95759	1140 aa		33.17	■■■□□ 2.9
SNF8-208	ENST00000510195	CLMN	Q96JQ2	1002 aa		33.17	■■■□□ 2.9
SNF8-208	ENST00000510195	RGS19	P49795	217 aa		33.16	■■■□□ 2.9
SNF8-208	ENST00000510195	TMOD2	Q9NZR1	351 aa		33.16	■■■□□ 2.9
SNF8-208	ENST00000510195	MTX1	Q13505	466 aa		33.15	■■■□□ 2.9
SNF8-208	ENST00000510195	FAM83A	Q86UY5	434 aa		33.15	■■■□□ 2.9
SNF8-208	ENST00000510195	LAMB1	P07942	1786 aa		33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	GPR25	O00155	361 aa		33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	SEMA3E	O15041	775 aa		33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	PKN2	Q16513	984 aa	Known RBP	33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	APOBEC3H	Q6NTF7	200 aa	Known RBP	33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	ATF7IP	Q6VMQ6	1270 aa		33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	ZNF296	Q8WUU4	475 aa	Predicted RBP	33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	TMEM39B	Q9GZU3	492 aa		33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	MYH13	Q9UKX3	1938 aa		33.14	■■■□□ 2.9
SNF8-208	ENST00000510195	TRIM27	P14373	513 aa		33.13	■■■□□ 2.89
SNF8-208	ENST00000510195	PA2G4	Q9UQ80	394 aa	Known RBP	33.13	■■■□□ 2.89
SNF8-208	ENST00000510195	IFNL1	Q8IU54	200 aa		33.12	■■■□□ 2.89
SNF8-208	ENST00000510195	HOOK2	Q96ED9	719 aa		33.12	■■■□□ 2.89
SNF8-208	ENST00000510195	SALL1	Q9NSC2	1324 aa		33.11	■■■□□ 2.89
SNF8-208	ENST00000510195	DENND2A	Q9ULE3	1009 aa		33.11	■■■□□ 2.89
SNF8-208	ENST00000510195	OTUD7B	Q6GQQ9	843 aa		33.1	■■■□□ 2.89
SNF8-208	ENST00000510195	SRGAP3	O43295	1099 aa		33.09	■■■□□ 2.89
SNF8-208	ENST00000510195	BCAR3	O75815	825 aa		33.09	■■■□□ 2.89
SNF8-208	ENST00000510195	MAP3K9	P80192	1104 aa		33.09	■■■□□ 2.89
SNF8-208	ENST00000510195	TESPA1	A2RU30	521 aa	Predicted RBP	33.08	■■■□□ 2.89
SNF8-208	ENST00000510195	CDAN1	Q8IWY9	1227 aa		33.08	■■■□□ 2.89
SNF8-208	ENST00000510195	FRAT1	Q92837	279 aa	Predicted RBP	33.08	■■■□□ 2.89
SNF8-208	ENST00000510195	AKAP2	Q9Y2D5	859 aa		33.08	■■■□□ 2.89
SNF8-208	ENST00000510195	FKTN	O75072	461 aa		33.07	■■■□□ 2.88
SNF8-208	ENST00000510195	DIEXF	Q68CQ4	756 aa	Known RBP	33.07	■■■□□ 2.88
SNF8-208	ENST00000510195	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	33.07	■■■□□ 2.88
SNF8-208	ENST00000510195	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
SNF8-208	ENST00000510195	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.07	■■■□□ 2.88
SNF8-208	ENST00000510195	RPAP1	Q9BWH6	1393 aa	Predicted RBP	33.07	■■■□□ 2.88
SNF8-208	ENST00000510195	GNAI2	P04899	355 aa		33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	LDHB	P07195	334 aa	Known RBP	33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	GJA5	P36382	358 aa		33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	CACNB3	P54284	484 aa		33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	MIER1	Q8N108	512 aa		33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	ZGPAT	Q8N5A5	531 aa	Known RBP	33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	OPTN	Q96CV9	577 aa		33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	CSAD	Q9Y600	493 aa		33.06	■■■□□ 2.88
SNF8-208	ENST00000510195	PHKA1	P46020	1223 aa		33.05	■■■□□ 2.88
SNF8-208	ENST00000510195	CCDC102B	Q68D86	513 aa		33.05	■■■□□ 2.88
SNF8-208	ENST00000510195	ELP3	Q9H9T3	547 aa		33.05	■■■□□ 2.88
SNF8-208	ENST00000510195	OTOF	Q9HC10	1997 aa		33.05	■■■□□ 2.88
SNF8-208	ENST00000510195	PDS5A	Q29RF7	1337 aa	Known RBP	33.04	■■■□□ 2.88
SNF8-208	ENST00000510195	IGF2BP3	O00425	579 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
SNF8-208	ENST00000510195	PRDX5	P30044	214 aa		33.04	■■■□□ 2.88
SNF8-208	ENST00000510195	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
SNF8-208	ENST00000510195	MLLT1	Q03111	559 aa	Predicted RBP	33.04	■■■□□ 2.88
SNF8-208	ENST00000510195	VGLL4	Q14135	290 aa		33.03	■■■□□ 2.88
SNF8-208	ENST00000510195	ZKSCAN2	Q63HK3	967 aa		33.03	■■■□□ 2.88
SNF8-208	ENST00000510195	R3HDML	Q9H3Y0	253 aa		33.03	■■■□□ 2.88
SNF8-208	ENST00000510195	DAGLA	Q9Y4D2	1042 aa		33.03	■■■□□ 2.88
SNF8-208	ENST00000510195	DCAF15	Q66K64	600 aa		33.02	■■■□□ 2.88
SNF8-208	ENST00000510195	FAM151A	Q8WW52	585 aa		33.02	■■■□□ 2.88
SNF8-208	ENST00000510195	TIMM10	P62072	90 aa		33.01	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms