RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
DDX41-211ENST00000510171 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 MRS2Q9HD23 443 aa13.16□□□□□ -0.3
DDX41-211ENST00000510171 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 SUCLG2Q96I99 432 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 CSADQ9Y600 493 aa13.15□□□□□ -0.3
DDX41-211ENST00000510171 MROH5Q6ZUA9 1318 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 CCL15-CCL14A0A0B4J2E2 113 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 ANP32CO43423 234 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
DDX41-211ENST00000510171 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
DDX41-211ENST00000510171 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
DDX41-211ENST00000510171 CAP1Q01518 475 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 VGLL4Q14135 290 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 TAF1CQ15572 869 aaPredicted RBP13.14□□□□□ -0.31
DDX41-211ENST00000510171 CCL15Q16663 113 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
DDX41-211ENST00000510171 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 NBPF11Q86T75 865 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX41-211ENST00000510171 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
DDX41-211ENST00000510171 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
DDX41-211ENST00000510171 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
DDX41-211ENST00000510171 KAZALD1Q96I82 304 aa13.13□□□□□ -0.31
DDX41-211ENST00000510171 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
DDX41-211ENST00000510171 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
DDX41-211ENST00000510171 MYH3P11055 1940 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 SPEF2Q9C093 1822 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
DDX41-211ENST00000510171 GRIK5Q16478 980 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 TEKT1Q969V4 418 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 HOOK2Q96ED9 719 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 ZNF333Q96JL9 665 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 MRIQ9BWK5 157 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
DDX41-211ENST00000510171 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
DDX41-211ENST00000510171 CETPP11597 493 aa13.11□□□□□ -0.31
DDX41-211ENST00000510171 CACNB3P54284 484 aa13.11□□□□□ -0.31
DDX41-211ENST00000510171 KIF22Q14807 665 aa13.11□□□□□ -0.31
DDX41-211ENST00000510171 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
DDX41-211ENST00000510171 ZDHHC15Q96MV8 337 aa13.11□□□□□ -0.31
DDX41-211ENST00000510171 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
DDX41-211ENST00000510171 TLR2O60603 784 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 PDE8BO95263 885 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 SNAPC2Q13487 334 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 FAM83AQ86UY5 434 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
DDX41-211ENST00000510171 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
DDX41-211ENST00000510171 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
DDX41-211ENST00000510171 UTYO14607 1347 aa13.1□□□□□ -0.31
DDX41-211ENST00000510171 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
DDX41-211ENST00000510171 BCAMP50895 628 aa13.09□□□□□ -0.31
DDX41-211ENST00000510171 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
DDX41-211ENST00000510171 RABL6Q3YEC7 729 aaPredicted RBP13.09□□□□□ -0.31
DDX41-211ENST00000510171 FKBP1CQ5VVH2 108 aa13.09□□□□□ -0.31
DDX41-211ENST00000510171 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
DDX41-211ENST00000510171 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
DDX41-211ENST00000510171 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
DDX41-211ENST00000510171 SNCAIPQ9Y6H5 919 aa13.09□□□□□ -0.31
DDX41-211ENST00000510171 IRF6O14896 467 aa13.08□□□□□ -0.32
DDX41-211ENST00000510171 MYCP01106 439 aaPredicted RBP13.08□□□□□ -0.32
DDX41-211ENST00000510171 GNRH1P01148 92 aa13.08□□□□□ -0.32
DDX41-211ENST00000510171 ANKRD44Q8N8A2 993 aa13.08□□□□□ -0.32
DDX41-211ENST00000510171 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
DDX41-211ENST00000510171 MAST3O60307 1309 aa13.08□□□□□ -0.32
DDX41-211ENST00000510171 IFIT1P09914 478 aaKnown RBP13.07□□□□□ -0.32
DDX41-211ENST00000510171 PRMT2P55345 433 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 PPIL2Q13356 520 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 HHIPL2Q6UWX4 724 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 MIGA2Q7L4E1 593 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 SH3TC2Q8TF17 1288 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
DDX41-211ENST00000510171 PPATQ06203 517 aa13.06□□□□□ -0.32
DDX41-211ENST00000510171 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
DDX41-211ENST00000510171 KLHDC4Q8TBB5 520 aa13.06□□□□□ -0.32
DDX41-211ENST00000510171 KIF16BQ96L93 1317 aa13.06□□□□□ -0.32
DDX41-211ENST00000510171 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
DDX41-211ENST00000510171 FGFR2P21802 821 aa13.05□□□□□ -0.32
DDX41-211ENST00000510171 HOXD10P28358 340 aa13.05□□□□□ -0.32
DDX41-211ENST00000510171 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
DDX41-211ENST00000510171 FAM9BQ8IZU0 186 aa13.05□□□□□ -0.32
DDX41-211ENST00000510171 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
DDX41-211ENST00000510171 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
DDX41-211ENST00000510171 FAM151AQ8WW52 585 aa13.05□□□□□ -0.32
DDX41-211ENST00000510171 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
DDX41-211ENST00000510171 PDHXO00330 501 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms