RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
SCARB2-204ENST00000509994 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
SCARB2-204ENST00000509994 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
SCARB2-204ENST00000509994 NOB1Q9ULX3 412 aaKnown RBP12.66□□□□□ -0.38
SCARB2-204ENST00000509994 MAST3O60307 1309 aa12.65□□□□□ -0.38
SCARB2-204ENST00000509994 MANSC4A6NHS7 340 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-204ENST00000509994 SOX10P56693 466 aa12.65□□□□□ -0.38
SCARB2-204ENST00000509994 LDLRAD1Q5T700 205 aa12.65□□□□□ -0.38
SCARB2-204ENST00000509994 ZNF296Q8WUU4 475 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-204ENST00000509994 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
SCARB2-204ENST00000509994 ELP3Q9H9T3 547 aa12.65□□□□□ -0.38
SCARB2-204ENST00000509994 HDAC5Q9UQL6 1122 aa12.65□□□□□ -0.38
SCARB2-204ENST00000509994 EYA2O00167 538 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-204ENST00000509994 TM4SF4P48230 202 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 CACNB3P54284 484 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 OTUD7BQ6GQQ9 843 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 ANKRD13AQ8IZ07 590 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 CSADQ9Y600 493 aa12.64□□□□□ -0.39
SCARB2-204ENST00000509994 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 GPR25O00155 361 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 FKTNO75072 461 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
SCARB2-204ENST00000509994 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 VGLL2Q8N8G2 317 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 TMEM39BQ9GZU3 492 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
SCARB2-204ENST00000509994 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
SCARB2-204ENST00000509994 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
SCARB2-204ENST00000509994 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-204ENST00000509994 INHBEP58166 350 aa12.62□□□□□ -0.39
SCARB2-204ENST00000509994 GRIK5Q16478 980 aa12.62□□□□□ -0.39
SCARB2-204ENST00000509994 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
SCARB2-204ENST00000509994 IFNL1Q8IU54 200 aa12.62□□□□□ -0.39
SCARB2-204ENST00000509994 LPIN2Q92539 896 aa12.62□□□□□ -0.39
SCARB2-204ENST00000509994 FRAT1Q92837 279 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-204ENST00000509994 OPTNQ96CV9 577 aa12.62□□□□□ -0.39
SCARB2-204ENST00000509994 LAMB1P07942 1786 aa12.61□□□□□ -0.39
SCARB2-204ENST00000509994 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
SCARB2-204ENST00000509994 WDR66Q8TBY9 1149 aa12.61□□□□□ -0.39
SCARB2-204ENST00000509994 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
SCARB2-204ENST00000509994 MYH2Q9UKX2 1941 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 UNCXA6NJT0 531 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 FGFR2P21802 821 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 RFX5P48382 616 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-204ENST00000509994 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
SCARB2-204ENST00000509994 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
SCARB2-204ENST00000509994 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 TRMT2AQ8IZ69 625 aaKnown RBP12.6□□□□□ -0.39
SCARB2-204ENST00000509994 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 MEIS3Q99687 375 aa12.6□□□□□ -0.39
SCARB2-204ENST00000509994 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
SCARB2-204ENST00000509994 IGF2BP3O00425 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCARB2-204ENST00000509994 IPO8O15397 1037 aaKnown RBP12.59□□□□□ -0.39
SCARB2-204ENST00000509994 CIAO1O76071 339 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
SCARB2-204ENST00000509994 GNAI3P08754 354 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 ATG9AQ7Z3C6 839 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 WRNIP1Q96S55 665 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 R3HDMLQ9H3Y0 253 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 SUGT1Q9Y2Z0 365 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 TRIM17Q9Y577 477 aa12.59□□□□□ -0.39
SCARB2-204ENST00000509994 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-204ENST00000509994 GJA5P36382 358 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-204ENST00000509994 RGS19P49795 217 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 TCP10Q12799 353 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 CRHR2Q13324 411 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 VGLL4Q14135 290 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-204ENST00000509994 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
SCARB2-204ENST00000509994 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
SCARB2-204ENST00000509994 CCL15-CCL14A0A0B4J2E2 113 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 PRDX5P30044 214 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 PHKA1P46020 1223 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 GTF2A2P52657 109 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 TAF1CQ15572 869 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-204ENST00000509994 DIXDC1Q155Q3 683 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 CCL15Q16663 113 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 NOM1Q5C9Z4 860 aaKnown RBP12.57□□□□□ -0.4
SCARB2-204ENST00000509994 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
SCARB2-204ENST00000509994 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 DOCK2Q92608 1830 aa12.57□□□□□ -0.4
SCARB2-204ENST00000509994 ADORA1P30542 326 aa12.56□□□□□ -0.4
SCARB2-204ENST00000509994 HNRNPUQ00839 825 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCARB2-204ENST00000509994 APOBEC3HQ6NTF7 200 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms