RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 HOXB7P09629 217 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 PRKCZQ05513 592 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 CERS5Q8N5B7 392 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 ANKLE1Q8NAG6 615 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 CRISPLD2Q9H0B8 497 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 CD209Q9NNX6 404 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
HMGCR-208ENST00000509431 MYH3P11055 1940 aa17.67■□□□□ 0.42
HMGCR-208ENST00000509431 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
HMGCR-208ENST00000509431 DEFB118Q96PH6 123 aa17.67■□□□□ 0.42
HMGCR-208ENST00000509431 PAK6Q9NQU5 681 aaPredicted RBP17.67■□□□□ 0.42
HMGCR-208ENST00000509431 ADCY3O60266 1144 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 RBM5P52756 815 aaKnown RBP eCLIP17.66■□□□□ 0.42
HMGCR-208ENST00000509431 CTSWP56202 376 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 PPIL2Q13356 520 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 ANKRD23Q86SG2 305 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 PXYLP1Q8TE99 480 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 TEPSINQ96N21 525 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 ANKRD2Q9GZV1 360 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 ARAP2Q8WZ64 1704 aa17.66■□□□□ 0.42
HMGCR-208ENST00000509431 F8W031 263 aaPredicted RBP17.65■□□□□ 0.42
HMGCR-208ENST00000509431 IRF6O14896 467 aa17.65■□□□□ 0.42
HMGCR-208ENST00000509431 INHAP05111 366 aa17.65■□□□□ 0.42
HMGCR-208ENST00000509431 TNNI2P48788 182 aa17.65■□□□□ 0.42
HMGCR-208ENST00000509431 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
HMGCR-208ENST00000509431 FAM122AQ96E09 287 aa17.65■□□□□ 0.42
HMGCR-208ENST00000509431 CWC25Q9NXE8 425 aaPredicted RBP17.65■□□□□ 0.42
HMGCR-208ENST00000509431 ZNF70Q9UC06 446 aaPredicted RBP17.65■□□□□ 0.42
HMGCR-208ENST00000509431 SNCAIPQ9Y6H5 919 aa17.65■□□□□ 0.42
HMGCR-208ENST00000509431 SPTBN5Q9NRC6 3674 aaKnown RBP17.63■□□□□ 0.41
HMGCR-208ENST00000509431 SYN1P17600 705 aa17.63■□□□□ 0.41
HMGCR-208ENST00000509431 KLRK1P26718 216 aa17.63■□□□□ 0.41
HMGCR-208ENST00000509431 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
HMGCR-208ENST00000509431 KCNJ4P48050 445 aa17.63■□□□□ 0.41
HMGCR-208ENST00000509431 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
HMGCR-208ENST00000509431 TTLL11Q8NHH1 800 aa17.63■□□□□ 0.41
HMGCR-208ENST00000509431 MAFAQ8NHW3 353 aaPredicted RBP17.63■□□□□ 0.41
HMGCR-208ENST00000509431 AOX1Q06278 1338 aa17.63■□□□□ 0.41
HMGCR-208ENST00000509431 PDHXO00330 501 aa17.62■□□□□ 0.41
HMGCR-208ENST00000509431 IRF5Q13568 498 aa17.62■□□□□ 0.41
HMGCR-208ENST00000509431 ZNF697Q5TEC3 545 aa17.62■□□□□ 0.41
HMGCR-208ENST00000509431 DIS3LQ8TF46 1054 aaKnown RBP17.62■□□□□ 0.41
HMGCR-208ENST00000509431 MYD88Q99836 296 aa17.62■□□□□ 0.41
HMGCR-208ENST00000509431 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
HMGCR-208ENST00000509431 GABRQQ9UN88 632 aa17.62■□□□□ 0.41
HMGCR-208ENST00000509431 COL2A1P02458 1487 aaPredicted RBP17.62■□□□□ 0.41
HMGCR-208ENST00000509431 PPATQ06203 517 aa17.61■□□□□ 0.41
HMGCR-208ENST00000509431 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
HMGCR-208ENST00000509431 C15orf52Q6ZUT6 534 aaKnown RBP17.61■□□□□ 0.41
HMGCR-208ENST00000509431 HOOK2Q96ED9 719 aa17.61■□□□□ 0.41
HMGCR-208ENST00000509431 PARK7Q99497 189 aaKnown RBP17.61■□□□□ 0.41
HMGCR-208ENST00000509431 GREM2Q9H772 168 aa17.61■□□□□ 0.41
HMGCR-208ENST00000509431 TNFRSF10AO00220 468 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 BCRP11274 1271 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 FLT3LGP49771 235 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 RIPK4P57078 832 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 CDAN1Q8IWY9 1227 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 WRNIP1Q96S55 665 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 TMEM39BQ9GZU3 492 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
HMGCR-208ENST00000509431 CHL1O00533 1208 aa17.59■□□□□ 0.41
HMGCR-208ENST00000509431 IL1R1P14778 569 aa17.59■□□□□ 0.41
HMGCR-208ENST00000509431 ELNP15502 786 aa17.59■□□□□ 0.41
HMGCR-208ENST00000509431 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
HMGCR-208ENST00000509431 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
HMGCR-208ENST00000509431 FAM161BQ96MY7 647 aa17.59■□□□□ 0.41
HMGCR-208ENST00000509431 TDRD3Q9H7E2 651 aaKnown RBP17.59■□□□□ 0.41
HMGCR-208ENST00000509431 TCP10L2B9ZVM9 353 aa17.58■□□□□ 0.4
HMGCR-208ENST00000509431 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
HMGCR-208ENST00000509431 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.58■□□□□ 0.4
HMGCR-208ENST00000509431 MPHOSPH8Q99549 860 aa17.58■□□□□ 0.4
HMGCR-208ENST00000509431 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.45e-7■■■■□ 19.8
HMGCR-208ENST00000509431 C11orf49Q9H6J7 331 aa17.58■□□□□ 0.4
HMGCR-208ENST00000509431 CDX2Q99626 313 aaPredicted RBP17.57■□□□□ 0.4
HMGCR-208ENST00000509431 KCNH4Q9UQ05 1017 aa17.57■□□□□ 0.4
HMGCR-208ENST00000509431 DDX60LQ5H9U9 1706 aaKnown RBP17.56■□□□□ 0.4
HMGCR-208ENST00000509431 DCAF15Q66K64 600 aa17.56■□□□□ 0.4
HMGCR-208ENST00000509431 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
HMGCR-208ENST00000509431 ZKSCAN4Q969J2 545 aaPredicted RBP17.56■□□□□ 0.4
HMGCR-208ENST00000509431 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
HMGCR-208ENST00000509431 RAPGEFL1Q9UHV5 662 aa17.56■□□□□ 0.4
HMGCR-208ENST00000509431 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
HMGCR-208ENST00000509431 TNPO2O14787 897 aaKnown RBP17.54■□□□□ 0.4
HMGCR-208ENST00000509431 CHRNDQ07001 517 aa17.54■□□□□ 0.4
HMGCR-208ENST00000509431 TTF2Q9UNY4 1162 aaKnown RBP17.54■□□□□ 0.4
HMGCR-208ENST00000509431 DDX58O95786 925 aaKnown RBP17.53■□□□□ 0.4
HMGCR-208ENST00000509431 DOCK3Q8IZD9 2030 aa17.53■□□□□ 0.4
HMGCR-208ENST00000509431 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 ITGA6P23229 1130 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 MOGSQ13724 837 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 COA7Q96BR5 231 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 ZNF341Q9BYN7 854 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 SEMA6BQ9H3T3 888 aa17.52■□□□□ 0.4
HMGCR-208ENST00000509431 PHAXQ9H814 394 aaKnown RBP17.52■□□□□ 0.4
HMGCR-208ENST00000509431 PRUNE2Q8WUY3 3088 aa17.52■□□□□ 0.39
HMGCR-208ENST00000509431 EYSQ5T1H1 3165 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms