RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
SDHA-210ENST00000509420 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
SDHA-210ENST00000509420 CHAF1AQ13111 956 aaPredicted RBP16.7■□□□□ 0.26
SDHA-210ENST00000509420 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
SDHA-210ENST00000509420 APOBEC3HQ6NTF7 200 aaKnown RBP16.7■□□□□ 0.26
SDHA-210ENST00000509420 SIL1Q9H173 461 aa16.7■□□□□ 0.26
SDHA-210ENST00000509420 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
SDHA-210ENST00000509420 COPRSQ9NQ92 184 aa16.7■□□□□ 0.26
SDHA-210ENST00000509420 NF2P35240 595 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
SDHA-210ENST00000509420 MTX1Q13505 466 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
SDHA-210ENST00000509420 LPIN2Q92539 896 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 CFHR5Q9BXR6 569 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 TMEM39BQ9GZU3 492 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
SDHA-210ENST00000509420 ZBTB22O15209 634 aa16.68■□□□□ 0.26
SDHA-210ENST00000509420 CACNB3P54284 484 aa16.68■□□□□ 0.26
SDHA-210ENST00000509420 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
SDHA-210ENST00000509420 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
SDHA-210ENST00000509420 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
SDHA-210ENST00000509420 MRIQ9BWK5 157 aa16.68■□□□□ 0.26
SDHA-210ENST00000509420 BRCA2P51587 3418 aa16.67■□□□□ 0.26
SDHA-210ENST00000509420 MYO1BO43795 1136 aa16.67■□□□□ 0.26
SDHA-210ENST00000509420 TBC1D8O95759 1140 aa16.67■□□□□ 0.26
SDHA-210ENST00000509420 ADORA1P30542 326 aa16.67■□□□□ 0.26
SDHA-210ENST00000509420 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
SDHA-210ENST00000509420 DGKZQ13574 1117 aa16.67■□□□□ 0.26
SDHA-210ENST00000509420 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
SDHA-210ENST00000509420 TCP10L2B9ZVM9 353 aa16.66■□□□□ 0.26
SDHA-210ENST00000509420 IGF2BP3O00425 579 aaKnown RBP eCLIP16.66■□□□□ 0.26
SDHA-210ENST00000509420 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
SDHA-210ENST00000509420 PHKA1P46020 1223 aa16.66■□□□□ 0.26
SDHA-210ENST00000509420 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
SDHA-210ENST00000509420 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
SDHA-210ENST00000509420 VPS37DQ86XT2 251 aa16.66■□□□□ 0.26
SDHA-210ENST00000509420 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 SLC5A1P13866 664 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 PRDX5P30044 214 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
SDHA-210ENST00000509420 RGS19P49795 217 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
SDHA-210ENST00000509420 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 ZNF296Q8WUU4 475 aaPredicted RBP16.65■□□□□ 0.26
SDHA-210ENST00000509420 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 PTPN18Q99952 460 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 SUGT1Q9Y2Z0 365 aa16.65■□□□□ 0.26
SDHA-210ENST00000509420 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.26
SDHA-210ENST00000509420 ZBTB48P10074 688 aaPredicted RBP16.64■□□□□ 0.25
SDHA-210ENST00000509420 CAP1Q01518 475 aa16.64■□□□□ 0.25
SDHA-210ENST00000509420 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
SDHA-210ENST00000509420 HHIPL2Q6UWX4 724 aa16.64■□□□□ 0.25
SDHA-210ENST00000509420 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.64■□□□□ 0.25
SDHA-210ENST00000509420 TEKT1Q969V4 418 aa16.64■□□□□ 0.25
SDHA-210ENST00000509420 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
SDHA-210ENST00000509420 SALL1Q9NSC2 1324 aa16.64■□□□□ 0.25
SDHA-210ENST00000509420 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
SDHA-210ENST00000509420 GPR25O00155 361 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 PPP1R12BO60237 982 aaPredicted RBP16.63■□□□□ 0.25
SDHA-210ENST00000509420 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 DIXDC1Q155Q3 683 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 ZNF384Q8TF68 577 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 CEP126Q9P2H0 1117 aa16.63■□□□□ 0.25
SDHA-210ENST00000509420 MKI67P46013 3256 aaKnown RBP16.63■□□□□ 0.25
SDHA-210ENST00000509420 RPAP1Q9BWH6 1393 aaPredicted RBP16.63■□□□□ 0.25
SDHA-210ENST00000509420 MYH2Q9UKX2 1941 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 CCDC85CA6NKD9 419 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 RLBP1P12271 317 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 SREBF2Q12772 1141 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 FKBP1CQ5VVH2 108 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 CTU1Q7Z7A3 348 aaKnown RBP16.62■□□□□ 0.25
SDHA-210ENST00000509420 TMEM57Q8N5G2 664 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 WDR66Q8TBY9 1149 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
SDHA-210ENST00000509420 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 FRAT2O75474 233 aaPredicted RBP16.61■□□□□ 0.25
SDHA-210ENST00000509420 GNAI3P08754 354 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
SDHA-210ENST00000509420 TIMM10P62072 90 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 TFCP2Q12800 502 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 NFIAQ12857 509 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 VGLL4Q14135 290 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
SDHA-210ENST00000509420 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 FAM83AQ86UY5 434 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 ELP3Q9H9T3 547 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
SDHA-210ENST00000509420 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
SDHA-210ENST00000509420 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
SDHA-210ENST00000509420 CDC42EP5Q6NZY7 148 aa16.6■□□□□ 0.25
SDHA-210ENST00000509420 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
SDHA-210ENST00000509420 FAM198AQ9UFP1 575 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms