RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CCER2I3L3R5 266 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 GPR25O00155 361 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 SLC5A1P13866 664 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 TNNI2P48788 182 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 RGS19P49795 217 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 GRIK5Q16478 980 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 WNK4Q96J92 1243 aa19.23■□□□□ 0.67
TPM3-219ENST00000509409 API5Q9BZZ5 524 aaKnown RBP19.23■□□□□ 0.67
TPM3-219ENST00000509409 UNCXA6NJT0 531 aa19.22■□□□□ 0.67
TPM3-219ENST00000509409 ALDH1A1P00352 501 aa19.22■□□□□ 0.67
TPM3-219ENST00000509409 RFX5P48382 616 aaPredicted RBP19.22■□□□□ 0.67
TPM3-219ENST00000509409 ANKRD13AQ8IZ07 590 aa19.22■□□□□ 0.67
TPM3-219ENST00000509409 TEKT1Q969V4 418 aa19.22■□□□□ 0.67
TPM3-219ENST00000509409 HDAC5Q9UQL6 1122 aa19.22■□□□□ 0.67
TPM3-219ENST00000509409 ZBTB48P10074 688 aaPredicted RBP19.21■□□□□ 0.67
TPM3-219ENST00000509409 FGFR2P21802 821 aa19.21■□□□□ 0.67
TPM3-219ENST00000509409 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
TPM3-219ENST00000509409 LPIN2Q92539 896 aa19.21■□□□□ 0.67
TPM3-219ENST00000509409 SIL1Q9H173 461 aa19.21■□□□□ 0.67
TPM3-219ENST00000509409 FKTNO75072 461 aa19.2■□□□□ 0.66
TPM3-219ENST00000509409 PKN2Q16513 984 aaKnown RBP19.2■□□□□ 0.66
TPM3-219ENST00000509409 IFNL1Q8IU54 200 aa19.2■□□□□ 0.66
TPM3-219ENST00000509409 TMEM39BQ9GZU3 492 aa19.2■□□□□ 0.66
TPM3-219ENST00000509409 TMOD2Q9NZR1 351 aa19.2■□□□□ 0.66
TPM3-219ENST00000509409 CEP126Q9P2H0 1117 aa19.2■□□□□ 0.66
TPM3-219ENST00000509409 A0A1B0GUL6 1792 aa19.19■□□□□ 0.66
TPM3-219ENST00000509409 OTUD7BQ6GQQ9 843 aa19.19■□□□□ 0.66
TPM3-219ENST00000509409 R3HDMLQ9H3Y0 253 aa19.19■□□□□ 0.66
TPM3-219ENST00000509409 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
TPM3-219ENST00000509409 SSC5DA1L4H1 1573 aa19.19■□□□□ 0.66
TPM3-219ENST00000509409 CACNB3P54284 484 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 SOX10P56693 466 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 NOM1Q5C9Z4 860 aaKnown RBP19.18■□□□□ 0.66
TPM3-219ENST00000509409 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 WDR66Q8TBY9 1149 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 MRIQ9BWK5 157 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 SUGT1Q9Y2Z0 365 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 LRRFIP2Q9Y608 721 aaKnown RBP19.18■□□□□ 0.66
TPM3-219ENST00000509409 MAST3O60307 1309 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 KIF16BQ96L93 1317 aa19.18■□□□□ 0.66
TPM3-219ENST00000509409 RARSP54136 660 aaKnown RBP19.17■□□□□ 0.66
TPM3-219ENST00000509409 MAP3K9P80192 1104 aa19.17■□□□□ 0.66
TPM3-219ENST00000509409 CDAN1Q8IWY9 1227 aa19.17■□□□□ 0.66
TPM3-219ENST00000509409 TEPSINQ96N21 525 aa19.17■□□□□ 0.66
TPM3-219ENST00000509409 CFHR5Q9BXR6 569 aa19.17■□□□□ 0.66
TPM3-219ENST00000509409 GNL3LQ9NVN8 582 aaKnown RBP19.17■□□□□ 0.66
TPM3-219ENST00000509409 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
TPM3-219ENST00000509409 HPS5Q9UPZ3 1129 aa19.17■□□□□ 0.66
TPM3-219ENST00000509409 GJA5P36382 358 aa19.16■□□□□ 0.66
TPM3-219ENST00000509409 ATP2B3Q16720 1220 aa19.16■□□□□ 0.66
TPM3-219ENST00000509409 OPTNQ96CV9 577 aa19.16■□□□□ 0.66
TPM3-219ENST00000509409 ZDHHC15Q96MV8 337 aa19.16■□□□□ 0.66
TPM3-219ENST00000509409 CSADQ9Y600 493 aa19.16■□□□□ 0.66
TPM3-219ENST00000509409 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.661e-7■■■■□ 23.3
TPM3-219ENST00000509409 CIAO1O76071 339 aa19.15■□□□□ 0.66
TPM3-219ENST00000509409 IL15P40933 162 aaPredicted RBP19.15■□□□□ 0.66
TPM3-219ENST00000509409 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
TPM3-219ENST00000509409 PA2G4Q9UQ80 394 aaKnown RBP19.15■□□□□ 0.66
TPM3-219ENST00000509409 APOBEC3HQ6NTF7 200 aaKnown RBP19.14■□□□□ 0.65
TPM3-219ENST00000509409 MEIS3Q99687 375 aa19.14■□□□□ 0.65
TPM3-219ENST00000509409 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
TPM3-219ENST00000509409 GNAI3P08754 354 aa19.13■□□□□ 0.65
TPM3-219ENST00000509409 FBXO46Q6PJ61 603 aaPredicted RBP19.13■□□□□ 0.65
TPM3-219ENST00000509409 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.13■□□□□ 0.65
TPM3-219ENST00000509409 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
TPM3-219ENST00000509409 HOOK2Q96ED9 719 aa19.13■□□□□ 0.65
TPM3-219ENST00000509409 VGLL4Q14135 290 aa19.12■□□□□ 0.65
TPM3-219ENST00000509409 FAM83AQ86UY5 434 aa19.12■□□□□ 0.65
TPM3-219ENST00000509409 DENND2AQ9ULE3 1009 aa19.12■□□□□ 0.65
TPM3-219ENST00000509409 LDHBP07195 334 aaKnown RBP19.11■□□□□ 0.65
TPM3-219ENST00000509409 GTF2A2P52657 109 aa19.11■□□□□ 0.65
TPM3-219ENST00000509409 FKBP1CQ5VVH2 108 aa19.11■□□□□ 0.65
TPM3-219ENST00000509409 INTS3Q68E01 1043 aaKnown RBP19.11■□□□□ 0.65
TPM3-219ENST00000509409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.11■□□□□ 0.65
TPM3-219ENST00000509409 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
TPM3-219ENST00000509409 FRAT1Q92837 279 aaPredicted RBP19.11■□□□□ 0.65
TPM3-219ENST00000509409 PTPN18Q99952 460 aa19.11■□□□□ 0.65
TPM3-219ENST00000509409 COPRSQ9NQ92 184 aa19.11■□□□□ 0.65
TPM3-219ENST00000509409 TRIM17Q9Y577 477 aa19.11■□□□□ 0.65
TPM3-219ENST00000509409 ECM29Q5VYK3 1845 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 CCL15-CCL14A0A0B4J2E2 113 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 TESPA1A2RU30 521 aaPredicted RBP19.1■□□□□ 0.65
TPM3-219ENST00000509409 PHKA1P46020 1223 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 CRHR2Q13324 411 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 CCL15Q16663 113 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 DCAF15Q66K64 600 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 OTUD5Q96G74 571 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 WRNIP1Q96S55 665 aa19.1■□□□□ 0.65
TPM3-219ENST00000509409 SRGAP3O43295 1099 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 PRDX5P30044 214 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 TIMM10P62072 90 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 TCP10Q12799 353 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 DIXDC1Q155Q3 683 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 MIGA2Q7L4E1 593 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 ERO1AQ96HE7 468 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 MS4A4AQ96JQ5 239 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 USP40Q9NVE5 1235 aa19.09■□□□□ 0.65
TPM3-219ENST00000509409 SEMA3EO15041 775 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 BCAR3O75815 825 aa19.08■□□□□ 0.64
TPM3-219ENST00000509409 ADORA1P30542 326 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms