RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 MCAMP43121 646 aa24.72■■□□□ 1.55
HOXC6-204ENST00000509328 RBM5P52756 815 aaKnown RBP eCLIP24.72■■□□□ 1.55
HOXC6-204ENST00000509328 ANGEL2Q5VTE6 544 aaKnown RBP24.72■■□□□ 1.55
HOXC6-204ENST00000509328 MRIQ9BWK5 157 aa24.72■■□□□ 1.55
HOXC6-204ENST00000509328 MYH2Q9UKX2 1941 aa24.71■■□□□ 1.55
HOXC6-204ENST00000509328 CRKP46108 304 aa24.71■■□□□ 1.55
HOXC6-204ENST00000509328 IRX6P78412 446 aaPredicted RBP24.71■■□□□ 1.55
HOXC6-204ENST00000509328 GLIS2Q9BZE0 524 aaPredicted RBP24.71■■□□□ 1.55
HOXC6-204ENST00000509328 SPDYE2BA6NHP3 402 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 SPDYE6P0CI01 402 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 PRDX5P30044 214 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 APLP1P51693 650 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 SPTY2D1Q68D10 685 aaPredicted RBP24.7■■□□□ 1.54
HOXC6-204ENST00000509328 PI16Q6UXB8 463 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 KRT26Q7Z3Y9 468 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 TEKT1Q969V4 418 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 ABCF2Q9UG63 623 aa24.7■■□□□ 1.54
HOXC6-204ENST00000509328 MYO1BO43795 1136 aa24.69■■□□□ 1.54
HOXC6-204ENST00000509328 SMARCA5O60264 1052 aaPredicted RBP24.69■■□□□ 1.54
HOXC6-204ENST00000509328 USP48Q86UV5 1035 aa24.69■■□□□ 1.54
HOXC6-204ENST00000509328 SULF1Q8IWU6 871 aa24.69■■□□□ 1.54
HOXC6-204ENST00000509328 PRMT6Q96LA8 375 aaPredicted RBP24.69■■□□□ 1.54
HOXC6-204ENST00000509328 BCL11AQ9H165 835 aa24.69■■□□□ 1.54
HOXC6-204ENST00000509328 PCDHAC2Q9Y5I4 1007 aa24.69■■□□□ 1.54
HOXC6-204ENST00000509328 MYO5AQ9Y4I1 1855 aaKnown RBP24.68■■□□□ 1.54
HOXC6-204ENST00000509328 TRAF5O00463 557 aa24.68■■□□□ 1.54
HOXC6-204ENST00000509328 HHIPL2Q6UWX4 724 aa24.68■■□□□ 1.54
HOXC6-204ENST00000509328 ERICH6Q7L0X2 663 aa24.67■■□□□ 1.54
HOXC6-204ENST00000509328 GCC1Q96CN9 775 aa24.67■■□□□ 1.54
HOXC6-204ENST00000509328 ZDHHC15Q96MV8 337 aa24.67■■□□□ 1.54
HOXC6-204ENST00000509328 RWDD1Q9H446 243 aaPredicted RBP24.67■■□□□ 1.54
HOXC6-204ENST00000509328 SNRKQ9NRH2 765 aa24.67■■□□□ 1.54
HOXC6-204ENST00000509328 ADM5C9JUS6 153 aa24.66■■□□□ 1.54
HOXC6-204ENST00000509328 APOBEC3FQ8IUX4 373 aaKnown RBP24.66■■□□□ 1.54
HOXC6-204ENST00000509328 FMR1Q06787 632 aaKnown RBP eCLIP24.65■■□□□ 1.54
HOXC6-204ENST00000509328 TBC1D9Q6ZT07 1266 aa24.65■■□□□ 1.54
HOXC6-204ENST00000509328 DZIP1Q86YF9 867 aaKnown RBP24.65■■□□□ 1.54
HOXC6-204ENST00000509328 MAST2Q6P0Q8 1798 aa24.65■■□□□ 1.54
HOXC6-204ENST00000509328 CYP2E1P05181 493 aaPredicted RBP24.64■■□□□ 1.54
HOXC6-204ENST00000509328 ZAP70P43403 619 aa24.64■■□□□ 1.54
HOXC6-204ENST00000509328 SLF2Q8IX21 1173 aa24.64■■□□□ 1.54
HOXC6-204ENST00000509328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.64■■□□□ 1.54
HOXC6-204ENST00000509328 AOX1Q06278 1338 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 DOCK2Q92608 1830 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 CLRN2A0PK11 232 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 TMEM88BA6NKF7 163 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 DIXDC1Q155Q3 683 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 SPDYE2Q495Y8 402 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 TDRD3Q9H7E2 651 aaKnown RBP24.63■■□□□ 1.53
HOXC6-204ENST00000509328 CREBZFQ9NS37 354 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 LRP2BPQ9P2M1 347 aa24.63■■□□□ 1.53
HOXC6-204ENST00000509328 APOBEC3HQ6NTF7 200 aaKnown RBP24.62■■□□□ 1.53
HOXC6-204ENST00000509328 RAI14Q9P0K7 980 aa24.62■■□□□ 1.53
HOXC6-204ENST00000509328 ZNF70Q9UC06 446 aaPredicted RBP24.62■■□□□ 1.53
HOXC6-204ENST00000509328 ZBTB47Q9UFB7 747 aaPredicted RBP24.62■■□□□ 1.53
HOXC6-204ENST00000509328 SCAF8Q9UPN6 1271 aaKnown RBP24.62■■□□□ 1.53
HOXC6-204ENST00000509328 DAGLAQ9Y4D2 1042 aa24.62■■□□□ 1.53
HOXC6-204ENST00000509328 IGSF3O75054 1194 aa24.61■■□□□ 1.53
HOXC6-204ENST00000509328 MECOMQ03112 1051 aa24.61■■□□□ 1.53
HOXC6-204ENST00000509328 DLK2Q6UY11 383 aa24.61■■□□□ 1.53
HOXC6-204ENST00000509328 CDCA5Q96FF9 252 aa24.61■■□□□ 1.53
HOXC6-204ENST00000509328 VEZTQ9HBM0 779 aa24.61■■□□□ 1.53
HOXC6-204ENST00000509328 CELF2O95319 508 aaKnown RBP24.6■■□□□ 1.53
HOXC6-204ENST00000509328 IGHDP01880 384 aa24.6■■□□□ 1.53
HOXC6-204ENST00000509328 ATP5JP18859 108 aa24.6■■□□□ 1.53
HOXC6-204ENST00000509328 GSTO1P78417 241 aa24.6■■□□□ 1.53
HOXC6-204ENST00000509328 CST9Q5W186 159 aa24.6■■□□□ 1.53
HOXC6-204ENST00000509328 NSUN4Q96CB9 384 aaKnown RBP24.6■■□□□ 1.53
HOXC6-204ENST00000509328 FAM163AQ96GL9 167 aaPredicted RBP24.6■■□□□ 1.53
HOXC6-204ENST00000509328 GAKO14976 1311 aa24.6■■□□□ 1.53
HOXC6-204ENST00000509328 LDHCP07864 332 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 TNFAIP1Q13829 316 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 ANKRD45Q5TZF3 282 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 SMC5Q8IY18 1101 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 GPATCH3Q96I76 525 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 ZNF408Q9H9D4 720 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 PIH1D3Q9NQM4 214 aaKnown RBP24.59■■□□□ 1.53
HOXC6-204ENST00000509328 PPP2R3BQ9Y5P8 575 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 NDUFB9Q9Y6M9 179 aa24.59■■□□□ 1.53
HOXC6-204ENST00000509328 CENPBP07199 599 aaPredicted RBP24.58■■□□□ 1.53
HOXC6-204ENST00000509328 ZNF384Q8TF68 577 aa24.58■■□□□ 1.53
HOXC6-204ENST00000509328 DEFB129Q9H1M3 183 aa24.58■■□□□ 1.53
HOXC6-204ENST00000509328 ECHDC1Q9NTX5 307 aa24.58■■□□□ 1.53
HOXC6-204ENST00000509328 TMOD2Q9NZR1 351 aa24.58■■□□□ 1.53
HOXC6-204ENST00000509328 MROH7-TTC4A0A0A0MT08 1334 aa24.58■■□□□ 1.52
HOXC6-204ENST00000509328 HTRA3P83110 453 aa24.57■■□□□ 1.52
HOXC6-204ENST00000509328 TTF1Q15361 905 aaPredicted RBP24.57■■□□□ 1.52
HOXC6-204ENST00000509328 TNNI2P48788 182 aa24.56■■□□□ 1.52
HOXC6-204ENST00000509328 FKBP1CQ5VVH2 108 aa24.56■■□□□ 1.52
HOXC6-204ENST00000509328 DNAJC2Q99543 621 aaKnown RBP24.56■■□□□ 1.52
HOXC6-204ENST00000509328 HAUS7Q99871 368 aa24.56■■□□□ 1.52
HOXC6-204ENST00000509328 BOLA2Q9H3K6 86 aa24.56■■□□□ 1.52
HOXC6-204ENST00000509328 ANTXR1Q9H6X2 564 aa24.56■■□□□ 1.52
HOXC6-204ENST00000509328 MYH7P12883 1935 aa24.55■■□□□ 1.52
HOXC6-204ENST00000509328 PRAMEF18Q5VWM3 479 aa24.55■■□□□ 1.52
HOXC6-204ENST00000509328 NAA16Q6N069 864 aaPredicted RBP24.55■■□□□ 1.52
HOXC6-204ENST00000509328 CDC42EP5Q6NZY7 148 aa24.55■■□□□ 1.52
HOXC6-204ENST00000509328 USP40Q9NVE5 1235 aa24.55■■□□□ 1.52
HOXC6-204ENST00000509328 GPR75-ASB3A0A0A6YYF3 556 aa24.54■■□□□ 1.52
HOXC6-204ENST00000509328 TCP10L2B9ZVM9 353 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms