RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ITPRIPQ8IWB1 547 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 SIRT2Q8IXJ6 389 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 SIL1Q9H173 461 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 VPS33BQ9H267 617 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 GPRC5DQ9NZD1 345 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 JAG2Q9Y219 1238 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 COG6Q9Y2V7 657 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 PCDHAC2Q9Y5I4 1007 aa9.03□□□□□ -0.96
TOPBP1-207ENST00000509162 PAPPA2Q9BXP8 1791 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 IPO8O15397 1037 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 ADORA1P30542 326 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 GYG1P46976 350 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 RRP1P56182 461 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 HTRA3P83110 453 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 MVPQ14764 893 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 CIAPIN1Q6FI81 312 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 JDP2Q8WYK2 163 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 CNNM1Q9NRU3 951 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 LEMD3Q9Y2U8 911 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 THSD7BQ9C0I4 1608 aa9.02□□□□□ -0.97
TOPBP1-207ENST00000509162 SASH1O94885 1247 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 VIL1P09327 827 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 EPHX2P34913 555 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 EIF6P56537 245 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 POTEEQ6S8J3 1075 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 GPIHBP1Q8IV16 184 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 FTSJ3Q8IY81 847 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 RBM46Q8TBY0 533 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 SSH3Q8TE77 659 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 FAM84BQ96KN1 310 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 EYA3Q99504 573 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 ANKRD2Q9GZV1 360 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 CD209Q9NNX6 404 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 HACL1Q9UJ83 578 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 PASKQ96RG2 1323 aa9.01□□□□□ -0.97
TOPBP1-207ENST00000509162 SSC5DA1L4H1 1573 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
TOPBP1-207ENST00000509162 GPR37O15354 613 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 SRGAP3O43295 1099 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 CIAO1O76071 339 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 TOMM70O94826 608 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 GNAI2P04899 355 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 GNAI3P08754 354 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 IL1R1P14778 569 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 VEGFAP15692 232 aaPredicted RBP9□□□□□ -0.97
TOPBP1-207ENST00000509162 ZNF280AP59817 542 aaPredicted RBP9□□□□□ -0.97
TOPBP1-207ENST00000509162 TAF7LQ5H9L4 462 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 METTL24Q5JXM2 366 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 PPP4R3BQ5MIZ7 849 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
TOPBP1-207ENST00000509162 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 DAXXQ9UER7 740 aaPredicted RBP9□□□□□ -0.97
TOPBP1-207ENST00000509162 ECM29Q5VYK3 1845 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 MROH5Q6ZUA9 1318 aa9□□□□□ -0.97
TOPBP1-207ENST00000509162 MAST2Q6P0Q8 1798 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 PDE8BO95263 885 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 ITGBL1O95965 494 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 UBE4AQ14139 1066 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 MAP1SQ66K74 1059 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 ZBED3Q96IU2 234 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 ZC3H12CQ9C0D7 883 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 COA1Q9GZY4 146 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 TLR7Q9NYK1 1049 aaKnown RBP8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 IQSEC3Q9UPP2 1182 aaPredicted RBP8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 AKAP11Q9UKA4 1901 aa8.99□□□□□ -0.97
TOPBP1-207ENST00000509162 TRAF5O00463 557 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 TRIM66O15016 1216 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 PHKA1P46020 1223 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 BCAMP50895 628 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 GTF2IP78347 998 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 ATP8B2P98198 1209 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 TFCP2Q12800 502 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 PUM3Q15397 648 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 TBC1D10BQ4KMP7 808 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 EAPPQ56P03 285 aaPredicted RBP8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 LDHDQ86WU2 507 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 TDRD7Q8NHU6 1098 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 SCAF8Q9UPN6 1271 aaKnown RBP8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 FAM205AQ6ZU69 1335 aa8.98□□□□□ -0.97
TOPBP1-207ENST00000509162 DOCK2Q92608 1830 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 ADM5C9JUS6 153 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 HSPA6P17066 643 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 KCNJ4P48050 445 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 SCARF1Q14162 830 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 STRIP1Q5VSL9 837 aa8.97□□□□□ -0.97
TOPBP1-207ENST00000509162 PI16Q6UXB8 463 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms