RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 ZNF70Q9UC06 446 aaPredicted RBP27.52■■■□□ 2
PACRGL-220ENST00000508952 FBXO3Q9UK99 471 aa27.52■■■□□ 2
PACRGL-220ENST00000508952 MKRN3Q13064 507 aaKnown RBP27.51■■□□□ 1.99
PACRGL-220ENST00000508952 RASA3Q14644 834 aa27.51■■□□□ 1.99
PACRGL-220ENST00000508952 ATF7IPQ6VMQ6 1270 aa27.51■■□□□ 1.99
PACRGL-220ENST00000508952 GNAI3P08754 354 aa27.5■■□□□ 1.99
PACRGL-220ENST00000508952 ATP2B3Q16720 1220 aa27.5■■□□□ 1.99
PACRGL-220ENST00000508952 LDLRAD1Q5T700 205 aa27.5■■□□□ 1.99
PACRGL-220ENST00000508952 NBPF12Q5TAG4 269 aaPredicted RBP27.5■■□□□ 1.99
PACRGL-220ENST00000508952 CLUAP1Q96AJ1 413 aa27.5■■□□□ 1.99
PACRGL-220ENST00000508952 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.5■■□□□ 1.99
PACRGL-220ENST00000508952 CEP126Q9P2H0 1117 aa27.5■■□□□ 1.99
PACRGL-220ENST00000508952 COPRSQ9NQ92 184 aa27.49■■□□□ 1.99
PACRGL-220ENST00000508952 IL15P40933 162 aaPredicted RBP27.48■■□□□ 1.99
PACRGL-220ENST00000508952 REM2Q8IYK8 340 aaPredicted RBP27.48■■□□□ 1.99
PACRGL-220ENST00000508952 ABHD8Q96I13 439 aa27.48■■□□□ 1.99
PACRGL-220ENST00000508952 SUPT20HL1Q3ZLR7 823 aa27.47■■□□□ 1.99
PACRGL-220ENST00000508952 TCP10L2B9ZVM9 353 aa27.46■■□□□ 1.99
PACRGL-220ENST00000508952 SRGAP3O43295 1099 aa27.46■■□□□ 1.99
PACRGL-220ENST00000508952 PPP1R12BO60237 982 aaPredicted RBP27.46■■□□□ 1.99
PACRGL-220ENST00000508952 TNFAIP1Q13829 316 aa27.46■■□□□ 1.99
PACRGL-220ENST00000508952 TEKT1Q969V4 418 aa27.46■■□□□ 1.99
PACRGL-220ENST00000508952 HDLBPQ00341 1268 aaKnown RBP27.45■■□□□ 1.98
PACRGL-220ENST00000508952 MAP3K11Q16584 847 aa27.45■■□□□ 1.98
PACRGL-220ENST00000508952 CDAN1Q8IWY9 1227 aa27.45■■□□□ 1.98
PACRGL-220ENST00000508952 CLMNQ96JQ2 1002 aa27.45■■□□□ 1.98
PACRGL-220ENST00000508952 OTOFQ9HC10 1997 aa27.44■■□□□ 1.98
PACRGL-220ENST00000508952 MTX1Q13505 466 aa27.44■■□□□ 1.98
PACRGL-220ENST00000508952 ZKSCAN2Q63HK3 967 aa27.44■■□□□ 1.98
PACRGL-220ENST00000508952 ADORA1P30542 326 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 PHKA1P46020 1223 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 CACNB3P54284 484 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 SPRYD7Q5W111 196 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 TMEM57Q8N5G2 664 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 WDR66Q8TBY9 1149 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 SLC10A4Q96EP9 437 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 TMEM39BQ9GZU3 492 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 SUGT1Q9Y2Z0 365 aa27.43■■□□□ 1.98
PACRGL-220ENST00000508952 MAST3O60307 1309 aa27.42■■□□□ 1.98
PACRGL-220ENST00000508952 USP2O75604 605 aaPredicted RBP27.42■■□□□ 1.98
PACRGL-220ENST00000508952 ZDHHC15Q96MV8 337 aa27.42■■□□□ 1.98
PACRGL-220ENST00000508952 TEPSINQ96N21 525 aa27.42■■□□□ 1.98
PACRGL-220ENST00000508952 MCOLN1Q9GZU1 580 aa27.42■■□□□ 1.98
PACRGL-220ENST00000508952 GNAI2P04899 355 aa27.41■■□□□ 1.98
PACRGL-220ENST00000508952 TM4SF4P48230 202 aa27.41■■□□□ 1.98
PACRGL-220ENST00000508952 DGKZQ13574 1117 aa27.41■■□□□ 1.98
PACRGL-220ENST00000508952 GNL3LQ9NVN8 582 aaKnown RBP27.41■■□□□ 1.98
PACRGL-220ENST00000508952 IREB2P48200 963 aaKnown RBP27.4■■□□□ 1.98
PACRGL-220ENST00000508952 TNNI2P48788 182 aa27.4■■□□□ 1.98
PACRGL-220ENST00000508952 TFCP2Q12800 502 aa27.4■■□□□ 1.98
PACRGL-220ENST00000508952 APOBEC3HQ6NTF7 200 aaKnown RBP27.4■■□□□ 1.98
PACRGL-220ENST00000508952 MRIQ9BWK5 157 aa27.4■■□□□ 1.98
PACRGL-220ENST00000508952 ZBED9Q6R2W3 1325 aa27.4■■□□□ 1.98
PACRGL-220ENST00000508952 TIMM10P62072 90 aa27.39■■□□□ 1.98
PACRGL-220ENST00000508952 SREBF2Q12772 1141 aa27.39■■□□□ 1.98
PACRGL-220ENST00000508952 WNK4Q96J92 1243 aa27.39■■□□□ 1.98
PACRGL-220ENST00000508952 TBC1D8O95759 1140 aa27.38■■□□□ 1.97
PACRGL-220ENST00000508952 PRDX5P30044 214 aa27.38■■□□□ 1.97
PACRGL-220ENST00000508952 CCDC102BQ68D86 513 aa27.38■■□□□ 1.97
PACRGL-220ENST00000508952 HHIPL2Q6UWX4 724 aa27.38■■□□□ 1.97
PACRGL-220ENST00000508952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.38■■□□□ 1.97
PACRGL-220ENST00000508952 PNMA6EA0A0J9YXQ4 647 aa27.37■■□□□ 1.97
PACRGL-220ENST00000508952 DIXDC1Q155Q3 683 aa27.37■■□□□ 1.97
PACRGL-220ENST00000508952 TMOD2Q9NZR1 351 aa27.37■■□□□ 1.97
PACRGL-220ENST00000508952 DENND2AQ9ULE3 1009 aa27.37■■□□□ 1.97
PACRGL-220ENST00000508952 LAMB1P07942 1786 aa27.37■■□□□ 1.97
PACRGL-220ENST00000508952 UNCXA6NJT0 531 aa27.36■■□□□ 1.97
PACRGL-220ENST00000508952 ANKRD13AQ8IZ07 590 aa27.36■■□□□ 1.97
PACRGL-220ENST00000508952 A0A1B0GUL7 405 aa27.35■■□□□ 1.97
PACRGL-220ENST00000508952 SEMA3EO15041 775 aa27.35■■□□□ 1.97
PACRGL-220ENST00000508952 LDHBP07195 334 aaKnown RBP27.35■■□□□ 1.97
PACRGL-220ENST00000508952 ZBTB48P10074 688 aaPredicted RBP27.35■■□□□ 1.97
PACRGL-220ENST00000508952 DAGLAQ9Y4D2 1042 aa27.35■■□□□ 1.97
PACRGL-220ENST00000508952 MANSC4A6NHS7 340 aaPredicted RBP27.34■■□□□ 1.97
PACRGL-220ENST00000508952 CCDC85CA6NKD9 419 aa27.34■■□□□ 1.97
PACRGL-220ENST00000508952 GJA5P36382 358 aa27.34■■□□□ 1.97
PACRGL-220ENST00000508952 FTSJ3Q8IY81 847 aaKnown RBP27.34■■□□□ 1.97
PACRGL-220ENST00000508952 XAGE2Q96GT9 111 aa27.34■■□□□ 1.97
PACRGL-220ENST00000508952 ELP3Q9H9T3 547 aa27.34■■□□□ 1.97
PACRGL-220ENST00000508952 AKAP2Q9Y2D5 859 aa27.34■■□□□ 1.97
PACRGL-220ENST00000508952 SALL1Q9NSC2 1324 aa27.34■■□□□ 1.97
PACRGL-220ENST00000508952 RASGRF1Q13972 1273 aa27.33■■□□□ 1.97
PACRGL-220ENST00000508952 MYH2Q9UKX2 1941 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 RLBP1P12271 317 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 FKBP1CQ5VVH2 108 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.32■■□□□ 1.96
PACRGL-220ENST00000508952 FAM83AQ86UY5 434 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 NEUROD6Q96NK8 337 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 R3HDMLQ9H3Y0 253 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 C1orf115Q9H7X2 142 aa27.32■■□□□ 1.96
PACRGL-220ENST00000508952 ITPRIPQ8IWB1 547 aa27.31■■□□□ 1.96
PACRGL-220ENST00000508952 ZNF296Q8WUU4 475 aaPredicted RBP27.31■■□□□ 1.96
PACRGL-220ENST00000508952 G3BP1Q13283 466 aaKnown RBP eCLIP27.3■■□□□ 1.96
PACRGL-220ENST00000508952 VGLL4Q14135 290 aa27.3■■□□□ 1.96
PACRGL-220ENST00000508952 MVPQ14764 893 aaKnown RBP27.3■■□□□ 1.96
PACRGL-220ENST00000508952 CDC42EP5Q6NZY7 148 aa27.3■■□□□ 1.96
PACRGL-220ENST00000508952 IFNL1Q8IU54 200 aa27.3■■□□□ 1.96
PACRGL-220ENST00000508952 OPTNQ96CV9 577 aa27.3■■□□□ 1.96
PACRGL-220ENST00000508952 IGF2BP3O00425 579 aaKnown RBP eCLIP27.29■■□□□ 1.96
PACRGL-220ENST00000508952 ZBTB22O15209 634 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms