RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TLR7Q9NYK1 1049 aaKnown RBP18.35■□□□□ 0.53
RNF4-210ENST00000508235 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
RNF4-210ENST00000508235 AKAP11Q9UKA4 1901 aa18.35■□□□□ 0.53
RNF4-210ENST00000508235 IGSF3O75054 1194 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 HSPA6P17066 643 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 MCAMP43121 646 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 CRKP46108 304 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 NBPF9Q3BBW0 867 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 ANGEL2Q5VTE6 544 aaKnown RBP18.34■□□□□ 0.53
RNF4-210ENST00000508235 KRT26Q7Z3Y9 468 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 SLF2Q8IX21 1173 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 ZBED3Q96IU2 234 aaPredicted RBP18.34■□□□□ 0.53
RNF4-210ENST00000508235 ABCF2Q9UG63 623 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 TRPM7Q96QT4 1865 aa18.34■□□□□ 0.53
RNF4-210ENST00000508235 PASKQ96RG2 1323 aa18.33■□□□□ 0.53
RNF4-210ENST00000508235 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
RNF4-210ENST00000508235 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
RNF4-210ENST00000508235 PRDX5P30044 214 aa18.33■□□□□ 0.52
RNF4-210ENST00000508235 IRX6P78412 446 aaPredicted RBP18.33■□□□□ 0.52
RNF4-210ENST00000508235 HHIPL2Q6UWX4 724 aa18.33■□□□□ 0.52
RNF4-210ENST00000508235 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.52
RNF4-210ENST00000508235 DZIP1Q86YF9 867 aaKnown RBP18.33■□□□□ 0.52
RNF4-210ENST00000508235 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
RNF4-210ENST00000508235 APLP1P51693 650 aa18.32■□□□□ 0.52
RNF4-210ENST00000508235 GRIK5Q16478 980 aa18.32■□□□□ 0.52
RNF4-210ENST00000508235 APOBEC3FQ8IUX4 373 aaKnown RBP18.32■□□□□ 0.52
RNF4-210ENST00000508235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.32■□□□□ 0.52
RNF4-210ENST00000508235 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
RNF4-210ENST00000508235 ZDHHC15Q96MV8 337 aa18.32■□□□□ 0.52
RNF4-210ENST00000508235 MYH2Q9UKX2 1941 aa18.31■□□□□ 0.52
RNF4-210ENST00000508235 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
RNF4-210ENST00000508235 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
RNF4-210ENST00000508235 GLIS2Q9BZE0 524 aaPredicted RBP18.31■□□□□ 0.52
RNF4-210ENST00000508235 LRP2BPQ9P2M1 347 aa18.31■□□□□ 0.52
RNF4-210ENST00000508235 ASTN2O75129 1339 aaPredicted RBP18.3■□□□□ 0.52
RNF4-210ENST00000508235 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
RNF4-210ENST00000508235 GSTO1P78417 241 aa18.3■□□□□ 0.52
RNF4-210ENST00000508235 TNFAIP1Q13829 316 aa18.3■□□□□ 0.52
RNF4-210ENST00000508235 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
RNF4-210ENST00000508235 LDHCP07864 332 aa18.29■□□□□ 0.52
RNF4-210ENST00000508235 TTF1Q15361 905 aaPredicted RBP18.29■□□□□ 0.52
RNF4-210ENST00000508235 SNRKQ9NRH2 765 aa18.29■□□□□ 0.52
RNF4-210ENST00000508235 TMOD2Q9NZR1 351 aa18.29■□□□□ 0.52
RNF4-210ENST00000508235 RAI14Q9P0K7 980 aa18.29■□□□□ 0.52
RNF4-210ENST00000508235 PPP2R3BQ9Y5P8 575 aa18.29■□□□□ 0.52
RNF4-210ENST00000508235 MAST2Q6P0Q8 1798 aa18.29■□□□□ 0.52
RNF4-210ENST00000508235 TMEM88BA6NKF7 163 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 TRAF5O00463 557 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 ATP5JP18859 108 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 ZAP70P43403 619 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 SPDYE2Q495Y8 402 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 TMED8Q6PL24 325 aaPredicted RBP18.28■□□□□ 0.52
RNF4-210ENST00000508235 TBC1D9Q6ZT07 1266 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 FAM163AQ96GL9 167 aaPredicted RBP18.28■□□□□ 0.52
RNF4-210ENST00000508235 CREBZFQ9NS37 354 aa18.28■□□□□ 0.52
RNF4-210ENST00000508235 ADM5C9JUS6 153 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
RNF4-210ENST00000508235 MECOMQ03112 1051 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 SMC5Q8IY18 1101 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 TDRD3Q9H7E2 651 aaKnown RBP18.27■□□□□ 0.52
RNF4-210ENST00000508235 VEZTQ9HBM0 779 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 ECHDC1Q9NTX5 307 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 ZNF70Q9UC06 446 aaPredicted RBP18.27■□□□□ 0.52
RNF4-210ENST00000508235 DAGLAQ9Y4D2 1042 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 PCDHAC2Q9Y5I4 1007 aa18.27■□□□□ 0.52
RNF4-210ENST00000508235 GAKO14976 1311 aa18.26■□□□□ 0.51
RNF4-210ENST00000508235 CLRN2A0PK11 232 aa18.26■□□□□ 0.51
RNF4-210ENST00000508235 NF2P35240 595 aa18.26■□□□□ 0.51
RNF4-210ENST00000508235 TNNI2P48788 182 aa18.26■□□□□ 0.51
RNF4-210ENST00000508235 DIXDC1Q155Q3 683 aa18.26■□□□□ 0.51
RNF4-210ENST00000508235 APOBEC3HQ6NTF7 200 aaKnown RBP18.26■□□□□ 0.51
RNF4-210ENST00000508235 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
RNF4-210ENST00000508235 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
RNF4-210ENST00000508235 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
RNF4-210ENST00000508235 IGHDP01880 384 aa18.25■□□□□ 0.51
RNF4-210ENST00000508235 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
RNF4-210ENST00000508235 NAA16Q6N069 864 aaPredicted RBP18.25■□□□□ 0.51
RNF4-210ENST00000508235 NSUN4Q96CB9 384 aaKnown RBP18.25■□□□□ 0.51
RNF4-210ENST00000508235 CDCA5Q96FF9 252 aa18.25■□□□□ 0.51
RNF4-210ENST00000508235 NOL10Q9BSC4 688 aaKnown RBP18.25■□□□□ 0.51
RNF4-210ENST00000508235 DEFB129Q9H1M3 183 aa18.25■□□□□ 0.51
RNF4-210ENST00000508235 ZNF408Q9H9D4 720 aa18.25■□□□□ 0.51
RNF4-210ENST00000508235 MROH7-TTC4A0A0A0MT08 1334 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 TTC41PQ6P2S7 1318 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 ERC2O15083 957 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 MAP4K4O95819 1239 aaPredicted RBP18.24■□□□□ 0.51
RNF4-210ENST00000508235 NEFLP07196 543 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 FKBP1CQ5VVH2 108 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
RNF4-210ENST00000508235 HAUS7Q99871 368 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 BOLA2Q9H3K6 86 aa18.24■□□□□ 0.51
RNF4-210ENST00000508235 PIH1D3Q9NQM4 214 aaKnown RBP18.24■□□□□ 0.51
RNF4-210ENST00000508235 IDH1O75874 414 aaKnown RBP18.23■□□□□ 0.51
RNF4-210ENST00000508235 CST9Q5W186 159 aa18.23■□□□□ 0.51
RNF4-210ENST00000508235 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
RNF4-210ENST00000508235 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 GOLIM4O00461 696 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 BAG3O95817 575 aa18.22■□□□□ 0.51
RNF4-210ENST00000508235 MX1P20591 662 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms