RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 KLHDC4Q8TBB5 520 aa13.84□□□□□ -0.19
PTPN13-207ENST00000508063 MCOLN1Q9GZU1 580 aa13.84□□□□□ -0.19
PTPN13-207ENST00000508063 TM4SF4P48230 202 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 TNNI2P48788 182 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.2
PTPN13-207ENST00000508063 HDLBPQ00341 1268 aaKnown RBP13.83□□□□□ -0.2
PTPN13-207ENST00000508063 PTPN12Q05209 780 aaKnown RBP13.83□□□□□ -0.2
PTPN13-207ENST00000508063 CHAF1AQ13111 956 aaPredicted RBP13.83□□□□□ -0.2
PTPN13-207ENST00000508063 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 LPIN2Q92539 896 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 ARHGAP45Q92619 1136 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 SLC10A4Q96EP9 437 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 SUGT1Q9Y2Z0 365 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 MAST3O60307 1309 aa13.83□□□□□ -0.2
PTPN13-207ENST00000508063 CCDC85CA6NKD9 419 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 IPO8O15397 1037 aaKnown RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 CIAO1O76071 339 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 FGFR2P21802 821 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 CRKP46108 304 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 INHBEP58166 350 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 RASA3Q14644 834 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 DZIP1LQ8IYY4 767 aaKnown RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 MRIQ9BWK5 157 aa13.82□□□□□ -0.2
PTPN13-207ENST00000508063 TDRD3Q9H7E2 651 aaKnown RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 ZNF70Q9UC06 446 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
PTPN13-207ENST00000508063 MANSC4A6NHS7 340 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-207ENST00000508063 ZBTB48P10074 688 aaPredicted RBP13.81□□□□□ -0.2
PTPN13-207ENST00000508063 BCAMP50895 628 aa13.81□□□□□ -0.2
PTPN13-207ENST00000508063 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
PTPN13-207ENST00000508063 TEKT1Q969V4 418 aa13.81□□□□□ -0.2
PTPN13-207ENST00000508063 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
PTPN13-207ENST00000508063 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
PTPN13-207ENST00000508063 GNAI3P08754 354 aa13.8□□□□□ -0.2
PTPN13-207ENST00000508063 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-207ENST00000508063 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
PTPN13-207ENST00000508063 NBPF12Q5TAG4 269 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-207ENST00000508063 INTS3Q68E01 1043 aaKnown RBP13.8□□□□□ -0.2
PTPN13-207ENST00000508063 ANKRD13AQ8IZ07 590 aa13.8□□□□□ -0.2
PTPN13-207ENST00000508063 WDR66Q8TBY9 1149 aa13.8□□□□□ -0.2
PTPN13-207ENST00000508063 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
PTPN13-207ENST00000508063 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
PTPN13-207ENST00000508063 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
PTPN13-207ENST00000508063 ATP2B3Q16720 1220 aa13.79□□□□□ -0.2
PTPN13-207ENST00000508063 NOM1Q5C9Z4 860 aaKnown RBP13.79□□□□□ -0.2
PTPN13-207ENST00000508063 ATG9AQ7Z3C6 839 aa13.79□□□□□ -0.2
PTPN13-207ENST00000508063 CTU1Q7Z7A3 348 aaKnown RBP13.79□□□□□ -0.2
PTPN13-207ENST00000508063 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
PTPN13-207ENST00000508063 SIL1Q9H173 461 aa13.79□□□□□ -0.2
PTPN13-207ENST00000508063 MYH13Q9UKX3 1938 aa13.79□□□□□ -0.2
PTPN13-207ENST00000508063 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
PTPN13-207ENST00000508063 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 USP2O75604 605 aaPredicted RBP13.78□□□□□ -0.2
PTPN13-207ENST00000508063 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 HOOK2Q96ED9 719 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 WNK4Q96J92 1243 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 MEIS3Q99687 375 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 CFHR5Q9BXR6 569 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 FZD1Q9UP38 647 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 AOX1Q06278 1338 aa13.78□□□□□ -0.2
PTPN13-207ENST00000508063 SEMA3EO15041 775 aa13.77□□□□□ -0.21
PTPN13-207ENST00000508063 GRIK5Q16478 980 aa13.77□□□□□ -0.21
PTPN13-207ENST00000508063 PKN2Q16513 984 aaKnown RBP13.77□□□□□ -0.21
PTPN13-207ENST00000508063 FKBP1CQ5VVH2 108 aa13.77□□□□□ -0.21
PTPN13-207ENST00000508063 OTUD7BQ6GQQ9 843 aa13.77□□□□□ -0.21
PTPN13-207ENST00000508063 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
PTPN13-207ENST00000508063 CLMNQ96JQ2 1002 aa13.77□□□□□ -0.21
PTPN13-207ENST00000508063 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
PTPN13-207ENST00000508063 GPR25O00155 361 aa13.76□□□□□ -0.21
PTPN13-207ENST00000508063 ATF7IPQ6VMQ6 1270 aa13.76□□□□□ -0.21
PTPN13-207ENST00000508063 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
PTPN13-207ENST00000508063 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
PTPN13-207ENST00000508063 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
PTPN13-207ENST00000508063 TEPSINQ96N21 525 aa13.76□□□□□ -0.21
PTPN13-207ENST00000508063 DENND2AQ9ULE3 1009 aa13.76□□□□□ -0.21
PTPN13-207ENST00000508063 SRGAP3O43295 1099 aa13.75□□□□□ -0.21
PTPN13-207ENST00000508063 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
PTPN13-207ENST00000508063 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
PTPN13-207ENST00000508063 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
PTPN13-207ENST00000508063 AKAP2Q9Y2D5 859 aa13.75□□□□□ -0.21
PTPN13-207ENST00000508063 CSADQ9Y600 493 aa13.75□□□□□ -0.21
PTPN13-207ENST00000508063 LAMB1P07942 1786 aa13.75□□□□□ -0.21
PTPN13-207ENST00000508063 SALL1Q9NSC2 1324 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 FKTNO75072 461 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 GNAI2P04899 355 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 LDHBP07195 334 aaKnown RBP13.74□□□□□ -0.21
PTPN13-207ENST00000508063 TRIM27P14373 513 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 RGS19P49795 217 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTPN13-207ENST00000508063 MTX1Q13505 466 aa13.74□□□□□ -0.21
PTPN13-207ENST00000508063 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
PTPN13-207ENST00000508063 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
PTPN13-207ENST00000508063 PA2G4Q9UQ80 394 aaKnown RBP13.74□□□□□ -0.21
PTPN13-207ENST00000508063 BCAR3O75815 825 aa13.73□□□□□ -0.21
PTPN13-207ENST00000508063 CACNB3P54284 484 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms