RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 MARCH10Q8NA82 808 aaPredicted RBP25.76■■□□□ 1.71
SPCS3-203ENST00000507678 SPATA5Q8NB90 893 aa25.76■■□□□ 1.71
SPCS3-203ENST00000507678 ZNF396Q96N95 335 aaPredicted RBP25.75■■□□□ 1.71
SPCS3-203ENST00000507678 SENP2Q9HC62 589 aa25.75■■□□□ 1.71
SPCS3-203ENST00000507678 MYO5AQ9Y4I1 1855 aaKnown RBP25.75■■□□□ 1.71
SPCS3-203ENST00000507678 SLC5A1P13866 664 aa25.75■■□□□ 1.71
SPCS3-203ENST00000507678 SLIT2O94813 1529 aa25.75■■□□□ 1.71
SPCS3-203ENST00000507678 BCAMP50895 628 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 ABCC12Q96J65 1359 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 MROH5Q6ZUA9 1318 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 AKAP11Q9UKA4 1901 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 A0A0U1RQG5 324 aaPredicted RBP25.74■■□□□ 1.71
SPCS3-203ENST00000507678 KCNQ2O43526 872 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 SMIM5Q71RC9 77 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 MICU3Q86XE3 530 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 AIFM3Q96NN9 605 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 ARMT1Q9H993 441 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 RCOR1Q9UKL0 485 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 ROBO1Q9Y6N7 1651 aa25.74■■□□□ 1.71
SPCS3-203ENST00000507678 MBD4O95243 580 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 UQCRFS1P1P0C7P4 283 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 ARID4AP29374 1257 aaPredicted RBP25.73■■□□□ 1.71
SPCS3-203ENST00000507678 CCDC73Q6ZRK6 1079 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 MYL10Q9BUA6 226 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 MYH3P11055 1940 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 DHX16O60231 1041 aaKnown RBP25.73■■□□□ 1.71
SPCS3-203ENST00000507678 CTDSPL2Q05D32 466 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 UBE3CQ15386 1083 aa25.73■■□□□ 1.71
SPCS3-203ENST00000507678 DOT1LQ8TEK3 1739 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 ZNF165P49910 485 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 FSIP1Q8NA03 581 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 SPATA31A1Q5TZJ5 1347 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 FGFR2P21802 821 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 TOMM22Q9NS69 142 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 NEDD4P46934 1319 aa25.72■■□□□ 1.71
SPCS3-203ENST00000507678 EVCP57679 992 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 SF3A1Q15459 793 aaKnown RBP25.71■■□□□ 1.71
SPCS3-203ENST00000507678 NFXL1Q6ZNB6 911 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 CLIC4Q9Y696 253 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 CAMTA2O94983 1202 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 DRC7Q8IY82 874 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 PHKBQ93100 1093 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 ZNF512BQ96KM6 892 aaPredicted RBP25.71■■□□□ 1.71
SPCS3-203ENST00000507678 STRBPQ96SI9 672 aaKnown RBP25.71■■□□□ 1.71
SPCS3-203ENST00000507678 COL16A1Q07092 1604 aaPredicted RBP25.71■■□□□ 1.71
SPCS3-203ENST00000507678 TCRBV5S4A2TA0A5A2 114 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 PRKAB2O43741 272 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 RRP12Q5JTH9 1297 aaKnown RBP25.71■■□□□ 1.71
SPCS3-203ENST00000507678 MIGA1Q8NAN2 632 aa25.71■■□□□ 1.71
SPCS3-203ENST00000507678 ANGEL1Q9UNK9 670 aaKnown RBP25.71■■□□□ 1.71
SPCS3-203ENST00000507678 ANKRD36CQ5JPF3 1778 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 IGHMBP2P38935 993 aaKnown RBP25.7■■□□□ 1.7
SPCS3-203ENST00000507678 BICDL1Q6ZP65 573 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 NAPBQ9H115 298 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 MYH7P12883 1935 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 A0A1B0GVL5 298 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 KINO60870 393 aaKnown RBP25.7■■□□□ 1.7
SPCS3-203ENST00000507678 METAP2P50579 478 aaKnown RBP eCLIP25.7■■□□□ 1.7
SPCS3-203ENST00000507678 MAP3K12Q12852 859 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 CCDC152Q4G0S7 254 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 PCDHA7Q9UN72 937 aa25.7■■□□□ 1.7
SPCS3-203ENST00000507678 WTIPA6NIX2 430 aaPredicted RBP25.69■■□□□ 1.7
SPCS3-203ENST00000507678 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
SPCS3-203ENST00000507678 STK38Q15208 465 aa25.69■■□□□ 1.7
SPCS3-203ENST00000507678 FBXL16Q8N461 479 aa25.69■■□□□ 1.7
SPCS3-203ENST00000507678 TRIM5Q9C035 493 aa25.69■■□□□ 1.7
SPCS3-203ENST00000507678 RBM43Q6ZSC3 357 aaKnown RBP25.69■■□□□ 1.7
SPCS3-203ENST00000507678 FBXO18Q8NFZ0 1043 aa25.69■■□□□ 1.7
SPCS3-203ENST00000507678 EPB41L4AQ9HCS5 686 aaPredicted RBP25.69■■□□□ 1.7
SPCS3-203ENST00000507678 KIF28PB7ZC32 967 aa25.68■■□□□ 1.7
SPCS3-203ENST00000507678 CHMP4CQ96CF2 233 aa25.68■■□□□ 1.7
SPCS3-203ENST00000507678 SNW1Q13573 536 aaKnown RBP25.68■■□□□ 1.7
SPCS3-203ENST00000507678 ZKSCAN3Q9BRR0 538 aa25.68■■□□□ 1.7
SPCS3-203ENST00000507678 C11orf57Q6ZUT1 292 aaPredicted RBP25.67■■□□□ 1.7
SPCS3-203ENST00000507678 IFNL3Q8IZI9 196 aa25.67■■□□□ 1.7
SPCS3-203ENST00000507678 CDC27P30260 824 aa25.67■■□□□ 1.7
SPCS3-203ENST00000507678 LRP2BPQ9P2M1 347 aa25.67■■□□□ 1.7
SPCS3-203ENST00000507678 SH2B2O14492 632 aaPredicted RBP25.66■■□□□ 1.7
SPCS3-203ENST00000507678 TMEM67Q5HYA8 995 aa25.66■■□□□ 1.7
SPCS3-203ENST00000507678 FAM13BQ9NYF5 915 aa25.66■■□□□ 1.7
SPCS3-203ENST00000507678 ABCF2Q9UG63 623 aa25.66■■□□□ 1.7
SPCS3-203ENST00000507678 UBE2Q2LH0YL09 131 aa25.66■■□□□ 1.7
SPCS3-203ENST00000507678 CHRNDQ07001 517 aa25.66■■□□□ 1.7
SPCS3-203ENST00000507678 NTSR2O95665 410 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 PTGS1P23219 599 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 TDO2P48775 406 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 NOLC1Q14978 699 aaKnown RBP eCLIP25.65■■□□□ 1.7
SPCS3-203ENST00000507678 APOA5Q6Q788 366 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 SYNE3Q6ZMZ3 975 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 LCORLQ8N3X6 602 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 ALG1Q9BT22 464 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 KCNF1Q9H3M0 494 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 FAM160A1Q05DH4 1040 aa25.65■■□□□ 1.7
SPCS3-203ENST00000507678 GNL2Q13823 731 aaKnown RBP25.64■■□□□ 1.7
SPCS3-203ENST00000507678 PIBF1Q8WXW3 757 aa25.64■■□□□ 1.7
SPCS3-203ENST00000507678 SDF4Q9BRK5 362 aa25.64■■□□□ 1.7
SPCS3-203ENST00000507678 PYCARDQ9ULZ3 195 aa25.64■■□□□ 1.7
SPCS3-203ENST00000507678 SLC4A4Q9Y6R1 1079 aa25.64■■□□□ 1.7
SPCS3-203ENST00000507678 PATL2C9JE40 543 aaKnown RBP25.64■■□□□ 1.69
SPCS3-203ENST00000507678 MYSM1Q5VVJ2 828 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms