RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 CAVIN4Q5BKX8 364 aa20.12■□□□□ 0.81
HOXC4-203ENST00000507650 PPP2R3BQ9Y5P8 575 aa20.12■□□□□ 0.81
HOXC4-203ENST00000507650 NF2P35240 595 aa20.11■□□□□ 0.81
HOXC4-203ENST00000507650 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
HOXC4-203ENST00000507650 VPS37DQ86XT2 251 aa20.11■□□□□ 0.81
HOXC4-203ENST00000507650 LPIN2Q92539 896 aa20.11■□□□□ 0.81
HOXC4-203ENST00000507650 COPRSQ9NQ92 184 aa20.11■□□□□ 0.81
HOXC4-203ENST00000507650 IFIT1P09914 478 aaKnown RBP20.1■□□□□ 0.81
HOXC4-203ENST00000507650 ADORA1P30542 326 aa20.1■□□□□ 0.81
HOXC4-203ENST00000507650 MYO1BO43795 1136 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 SLC5A1P13866 664 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 CACNB3P54284 484 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 MTX1Q13505 466 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 ATP2B3Q16720 1220 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 ARMC9Q7Z3E5 817 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 FRAT1Q92837 279 aaPredicted RBP20.09■□□□□ 0.81
HOXC4-203ENST00000507650 CLUAP1Q96AJ1 413 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 MCOLN1Q9GZU1 580 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 FBXO3Q9UK99 471 aa20.09■□□□□ 0.81
HOXC4-203ENST00000507650 MYO5AQ9Y4I1 1855 aaKnown RBP20.08■□□□□ 0.81
HOXC4-203ENST00000507650 USP2O75604 605 aaPredicted RBP20.08■□□□□ 0.81
HOXC4-203ENST00000507650 GJA5P36382 358 aa20.08■□□□□ 0.81
HOXC4-203ENST00000507650 PHKA1P46020 1223 aa20.08■□□□□ 0.81
HOXC4-203ENST00000507650 SPRYD7Q5W111 196 aa20.08■□□□□ 0.81
HOXC4-203ENST00000507650 APOBEC3HQ6NTF7 200 aaKnown RBP20.08■□□□□ 0.81
HOXC4-203ENST00000507650 TBC1D22AQ8WUA7 517 aa20.08■□□□□ 0.81
HOXC4-203ENST00000507650 TMEM39BQ9GZU3 492 aa20.08■□□□□ 0.81
HOXC4-203ENST00000507650 TCP10L2B9ZVM9 353 aa20.07■□□□□ 0.8
HOXC4-203ENST00000507650 IL15P40933 162 aaPredicted RBP20.07■□□□□ 0.8
HOXC4-203ENST00000507650 TM4SF4P48230 202 aa20.07■□□□□ 0.8
HOXC4-203ENST00000507650 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
HOXC4-203ENST00000507650 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
HOXC4-203ENST00000507650 ZDHHC15Q96MV8 337 aa20.07■□□□□ 0.8
HOXC4-203ENST00000507650 R3HDMLQ9H3Y0 253 aa20.07■□□□□ 0.8
HOXC4-203ENST00000507650 AK9Q5TCS8 1911 aa20.06■□□□□ 0.8
HOXC4-203ENST00000507650 PNMA6EA0A0J9YXQ4 647 aa20.06■□□□□ 0.8
HOXC4-203ENST00000507650 FRAT2O75474 233 aaPredicted RBP20.06■□□□□ 0.8
HOXC4-203ENST00000507650 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
HOXC4-203ENST00000507650 DOCK2Q92608 1830 aa20.06■□□□□ 0.8
HOXC4-203ENST00000507650 SRGAP3O43295 1099 aa20.05■□□□□ 0.8
HOXC4-203ENST00000507650 GNAI3P08754 354 aa20.05■□□□□ 0.8
HOXC4-203ENST00000507650 RLBP1P12271 317 aa20.05■□□□□ 0.8
HOXC4-203ENST00000507650 PRDX5P30044 214 aa20.05■□□□□ 0.8
HOXC4-203ENST00000507650 REM2Q8IYK8 340 aaPredicted RBP20.05■□□□□ 0.8
HOXC4-203ENST00000507650 TEKT1Q969V4 418 aa20.05■□□□□ 0.8
HOXC4-203ENST00000507650 WNK4Q96J92 1243 aa20.05■□□□□ 0.8
HOXC4-203ENST00000507650 HTTP42858 3142 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 TBC1D8O95759 1140 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 TIMM10P62072 90 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 TFCP2Q12800 502 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 DGKZQ13574 1117 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 DIXDC1Q155Q3 683 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 MRIQ9BWK5 157 aa20.04■□□□□ 0.8
HOXC4-203ENST00000507650 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
HOXC4-203ENST00000507650 PPP1R12BO60237 982 aaPredicted RBP20.03■□□□□ 0.8
HOXC4-203ENST00000507650 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
HOXC4-203ENST00000507650 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
HOXC4-203ENST00000507650 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
HOXC4-203ENST00000507650 CNKSR2Q8WXI2 1034 aa20.03■□□□□ 0.8
HOXC4-203ENST00000507650 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
HOXC4-203ENST00000507650 SUGT1Q9Y2Z0 365 aa20.03■□□□□ 0.8
HOXC4-203ENST00000507650 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
HOXC4-203ENST00000507650 ZBED9Q6R2W3 1325 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 ZBTB22O15209 634 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 TNFAIP1Q13829 316 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 ZKSCAN2Q63HK3 967 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 HHIPL2Q6UWX4 724 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 WDR66Q8TBY9 1149 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 CDK5RAP2Q96SN8 1893 aa20.02■□□□□ 0.8
HOXC4-203ENST00000507650 SALL1Q9NSC2 1324 aa20.02■□□□□ 0.79
HOXC4-203ENST00000507650 IGF2BP3O00425 579 aaKnown RBP eCLIP20.01■□□□□ 0.79
HOXC4-203ENST00000507650 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
HOXC4-203ENST00000507650 SLC10A4Q96EP9 437 aa20.01■□□□□ 0.79
HOXC4-203ENST00000507650 HDAC5Q9UQL6 1122 aa20.01■□□□□ 0.79
HOXC4-203ENST00000507650 MAST3O60307 1309 aa20.01■□□□□ 0.79
HOXC4-203ENST00000507650 A0A1B0GUL7 405 aa20■□□□□ 0.79
HOXC4-203ENST00000507650 GNAI2P04899 355 aa20■□□□□ 0.79
HOXC4-203ENST00000507650 ZBTB48P10074 688 aaPredicted RBP20■□□□□ 0.79
HOXC4-203ENST00000507650 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20■□□□□ 0.79
HOXC4-203ENST00000507650 ZNF296Q8WUU4 475 aaPredicted RBP20■□□□□ 0.79
HOXC4-203ENST00000507650 XAGE2Q96GT9 111 aa20■□□□□ 0.79
HOXC4-203ENST00000507650 ZSWIM8A7E2V4 1837 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 RFX7Q2KHR2 1363 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 RPAP1Q9BWH6 1393 aaPredicted RBP19.99■□□□□ 0.79
HOXC4-203ENST00000507650 IREB2P48200 963 aaKnown RBP19.99■□□□□ 0.79
HOXC4-203ENST00000507650 NFIAQ12857 509 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 VGLL4Q14135 290 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 CDC42EP5Q6NZY7 148 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 ANKRD13AQ8IZ07 590 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 ZNF384Q8TF68 577 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 CFHR5Q9BXR6 569 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 C1orf115Q9H7X2 142 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 ELP3Q9H9T3 547 aa19.99■□□□□ 0.79
HOXC4-203ENST00000507650 TNRC18O15417 2968 aaPredicted RBP19.98■□□□□ 0.79
HOXC4-203ENST00000507650 MAST2Q6P0Q8 1798 aa19.98■□□□□ 0.79
HOXC4-203ENST00000507650 UNCXA6NJT0 531 aa19.98■□□□□ 0.79
HOXC4-203ENST00000507650 CCDC85CA6NKD9 419 aa19.98■□□□□ 0.79
HOXC4-203ENST00000507650 SREBF2Q12772 1141 aa19.98■□□□□ 0.79
HOXC4-203ENST00000507650 POLA2Q14181 598 aa19.98■□□□□ 0.79
HOXC4-203ENST00000507650 FKBP1CQ5VVH2 108 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms