RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SV2BQ7L1I2 683 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 HS2ST1Q7LGA3 356 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 ZNF417Q8TAU3 575 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 ZNF587Q96SQ5 575 aaPredicted RBP5.64□□□□□ -1.51
LSM6-205ENST00000507449 TGIF2Q9GZN2 237 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 RRAGCQ9HB90 399 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 KBTBD4Q9NVX7 518 aa5.64□□□□□ -1.51
LSM6-205ENST00000507449 TM4SF5O14894 197 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 B3GALT4O96024 378 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 ESRRAP11474 423 aaPredicted RBP5.63□□□□□ -1.51
LSM6-205ENST00000507449 CDC27P30260 824 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 TNNI2P48788 182 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 ZNF157P51786 506 aaPredicted RBP5.63□□□□□ -1.51
LSM6-205ENST00000507449 USP48Q86UV5 1035 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 IL22RA1Q8N6P7 574 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 STK35Q8TDR2 534 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 C8orf37Q96NL8 207 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 TINF2Q9BSI4 451 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 ACBD3Q9H3P7 528 aa5.63□□□□□ -1.51
LSM6-205ENST00000507449 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.63□□□□□ -1.51
LSM6-205ENST00000507449 C1QTNF9BB2RNN3 333 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 SOX1O00570 391 aaPredicted RBP5.62□□□□□ -1.51
LSM6-205ENST00000507449 PAX4O43316 350 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 NID1P14543 1247 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 MAP3K11Q16584 847 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 TXNDC11Q6PKC3 985 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 PHC3Q8NDX5 983 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 RSRP1Q9BUV0 290 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 CEP44Q9C0F1 390 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 ZFYVE1Q9HBF4 777 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 PRDM6Q9NQX0 595 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 NOP53Q9NZM5 478 aaKnown RBP5.62□□□□□ -1.51
LSM6-205ENST00000507449 GPN3Q9UHW5 284 aaPredicted RBP5.62□□□□□ -1.51
LSM6-205ENST00000507449 TLR6Q9Y2C9 796 aa5.62□□□□□ -1.51
LSM6-205ENST00000507449 H3BRJ5 948 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 LILRB5O75023 590 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 IGSF3O75054 1194 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 BMP6P22004 513 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 CDC25BP30305 580 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 DGKGP49619 791 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 LIG3P49916 1009 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 ZC3H6P61129 1189 aaKnown RBP5.61□□□□□ -1.51
LSM6-205ENST00000507449 NAALADL2Q58DX5 795 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 RHOVQ96L33 236 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 TMEM39AQ9NV64 488 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 ADAMTS1Q9UHI8 967 aa5.61□□□□□ -1.51
LSM6-205ENST00000507449 LINC01387J3KSC0 135 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 TFE3P19532 575 aaPredicted RBP5.6□□□□□ -1.51
LSM6-205ENST00000507449 GARTP22102 1010 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 IKBKEQ14164 716 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 PCNX4Q63HM2 1172 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 MSL1Q68DK7 614 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 TTBK2Q6IQ55 1244 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 ZNF654Q8IZM8 581 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 CACTIN-AS1Q8N1I8 211 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 TMEM74Q96NL1 305 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 NRSN2Q9GZP1 204 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 CCSER2Q9H7U1 834 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 PPME1Q9Y570 386 aa5.6□□□□□ -1.51
LSM6-205ENST00000507449 MINDY4BA8MYZ0 360 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 DOC2BQ14184 412 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 AGMOQ6ZNB7 445 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 PDZD3Q86UT5 571 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 GRIN3AQ8TCU5 1115 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 CARD10Q9BWT7 1032 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 KCNQ5Q9NR82 932 aa5.59□□□□□ -1.51
LSM6-205ENST00000507449 DEAF1O75398 565 aaPredicted RBP5.58□□□□□ -1.52
LSM6-205ENST00000507449 ECEL1O95672 775 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 PF4P02776 101 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 AMPD1P23109 780 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 GBP2P32456 591 aaPredicted RBP5.58□□□□□ -1.52
LSM6-205ENST00000507449 SNRPNP63162 240 aaKnown RBP5.58□□□□□ -1.52
LSM6-205ENST00000507449 FAM160A1Q05DH4 1040 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 PAK2Q13177 524 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 SETDB1Q15047 1291 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 FBXL19Q6PCT2 694 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 MPRIPQ6WCQ1 1025 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 WFDC8Q8IUA0 241 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 SULF2Q8IWU5 870 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 DMRTC2Q8IXT2 367 aaPredicted RBP5.58□□□□□ -1.52
LSM6-205ENST00000507449 GALNT11Q8NCW6 608 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 SLC7A3Q8WY07 619 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 SOX17Q9H6I2 414 aaPredicted RBP5.58□□□□□ -1.52
LSM6-205ENST00000507449 PCDHB5Q9Y5E4 795 aa5.58□□□□□ -1.52
LSM6-205ENST00000507449 GNB5O14775 395 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 FSCN2O14926 492 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 CTSBP07858 339 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 RLBP1P12271 317 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 NME2P22392 152 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 COL8A1P27658 744 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 EIF4A3P38919 411 aaKnown RBP5.57□□□□□ -1.52
LSM6-205ENST00000507449 GATA4P43694 442 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 GJA8P48165 433 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 CABP4P57796 275 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 RPS26P62854 115 aaKnown RBP5.57□□□□□ -1.52
LSM6-205ENST00000507449 PIP4K2BP78356 416 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 LMNB2Q03252 620 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 PPP2R3AQ06190 1150 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 ZNF252P-AS1Q0IIN9 211 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 CAMK2GQ13555 558 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms