RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 CNTNAP4Q9C0A0 1308 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 CA8P35219 290 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 TMEM266Q2M3C6 531 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 TPM1P09493 284 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 SDSP20132 328 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 GPHNQ9NQX3 736 aaPredicted RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 KLF18A0A0U1RQI7 1052 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 PPFIA3O75145 1194 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 BRDTQ58F21 947 aaPredicted RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 RRP36Q96EU6 259 aaKnown RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 C8orf76Q96K31 380 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 IPO9Q96P70 1041 aaKnown RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 LRRC2Q9BYS8 371 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 ZBTB43O43298 467 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 GUCY1B3Q02153 619 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 APPBP2Q92624 585 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 ZKSCAN3Q9BRR0 538 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 SLC5A4Q9NY91 659 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 HACL1Q9UJ83 578 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 PHKA1P46020 1223 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 KRT26Q7Z3Y9 468 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 TTLL11Q8NHH1 800 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 CELF1Q92879 486 aaKnown RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 FAM13BQ9NYF5 915 aa10.97□□□□□ -0.65
NEK1-203ENST00000507142 RBM8AQ9Y5S9 174 aaKnown RBP10.97□□□□□ -0.65
NEK1-203ENST00000507142 PARP1P09874 1014 aaKnown RBP10.96□□□□□ -0.65
NEK1-203ENST00000507142 CNGA1P29973 690 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 ME1P48163 572 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 NAPAP54920 295 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 RTN1Q16799 776 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 RAB34Q9BZG1 259 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 ANGEL1Q9UNK9 670 aaKnown RBP10.96□□□□□ -0.65
NEK1-203ENST00000507142 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 SPDYE3A6NKU9 549 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 EIF5P55010 431 aaKnown RBP10.96□□□□□ -0.65
NEK1-203ENST00000507142 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.65
NEK1-203ENST00000507142 GPAA1O43292 621 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 MYCP01106 439 aaPredicted RBP10.96□□□□□ -0.66
NEK1-203ENST00000507142 DHX8Q14562 1220 aaKnown RBP10.96□□□□□ -0.66
NEK1-203ENST00000507142 SP8Q8IXZ3 490 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 HOMER2Q9NSB8 354 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 SLC1A4P43007 532 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 CFAP100Q494V2 611 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 C9orf131Q5VYM1 1079 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.66
NEK1-203ENST00000507142 SP4Q02446 784 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 OLFM4Q6UX06 510 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 FBXO3Q9UK99 471 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 DEPDC5O75140 1603 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
NEK1-203ENST00000507142 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 PTPDC1A2A3K4 754 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 SEMA3EO15041 775 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 PLSCR1O15162 318 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 PRC1O43663 620 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 CERKLQ49MI3 558 aaPredicted RBP10.95□□□□□ -0.66
NEK1-203ENST00000507142 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
NEK1-203ENST00000507142 NBPF15Q8N660 670 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 SASH1O94885 1247 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 MYO3BQ8WXR4 1341 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 FIBPO43427 364 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 GPSM2P81274 684 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 SKAP1Q86WV1 359 aa10.95□□□□□ -0.66
NEK1-203ENST00000507142 YY1P25490 414 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 ADORA1P30542 326 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 SASS6Q6UVJ0 657 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 NSMFQ6X4W1 530 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 MIGA2Q7L4E1 593 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 BRF1Q92994 677 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
NEK1-203ENST00000507142 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CALM1P0DP23 149 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CALM2P0DP24 149 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CALM3P0DP25 149 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
NEK1-203ENST00000507142 CHST3Q7LGC8 479 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 ZNRF3Q9ULT6 936 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 KINO60870 393 aaKnown RBP10.94□□□□□ -0.66
NEK1-203ENST00000507142 OSBPP22059 807 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 TGFB2P61812 414 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CCDC148Q8NFR7 591 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 RTL9Q8NET4 1388 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CIAO1O76071 339 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 LMNB1P20700 586 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 BMP2KLQ5H9B9 411 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 CLIP2Q9UDT6 1046 aa10.94□□□□□ -0.66
NEK1-203ENST00000507142 TCEANC2Q96MN5 208 aa10.93□□□□□ -0.66
NEK1-203ENST00000507142 MINPP1Q9UNW1 487 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms