RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 MRPL18Q9H0U6 180 aaKnown RBP5.05□□□□□ -1.6
GYPB-207ENST00000506679 USP31Q70CQ4 1352 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 LOC100289279A0A1B0GTE1 492 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 UNCXA6NJT0 531 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 F8W735 103 aaPredicted RBP5.04□□□□□ -1.6
GYPB-207ENST00000506679 APBA3O96018 575 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 ITGAEP38570 1179 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 MBTPS1Q14703 1052 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 PLA2G4EQ3MJ16 856 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 KIAA1211Q6ZU35 1233 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 PDZD3Q86UT5 571 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 TMEM151AQ8N4L1 468 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 TMEM39AQ9NV64 488 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 AKAP2Q9Y2D5 859 aa5.04□□□□□ -1.6
GYPB-207ENST00000506679 C1QTNF9BB2RNN3 333 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 CTSBP07858 339 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 NLRP12P59046 1061 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 NRG1Q02297 640 aaPredicted RBP5.03□□□□□ -1.6
GYPB-207ENST00000506679 GSTM4Q03013 218 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 AP3B2Q13367 1082 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 MEI1Q5TIA1 1274 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 SV2BQ7L1I2 683 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 UBASH3BQ8TF42 649 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 CEP44Q9C0F1 390 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 MRS2Q9HD23 443 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 CACNA2D2Q9NY47 1150 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 KIAA1522Q9P206 1035 aaPredicted RBP5.03□□□□□ -1.6
GYPB-207ENST00000506679 VTI1BQ9UEU0 232 aa5.03□□□□□ -1.6
GYPB-207ENST00000506679 GPN3Q9UHW5 284 aaPredicted RBP5.03□□□□□ -1.6
GYPB-207ENST00000506679 MEGF11A6BM72 1044 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 FBXO24O75426 580 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 PAGE1O75459 146 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 ECEL1O95672 775 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 DLGAP3O95886 979 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 RECKO95980 971 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 CYP11A1P05108 521 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 CELA3AP09093 270 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 BMP6P22004 513 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 ZNF157P51786 506 aaPredicted RBP5.02□□□□□ -1.61
GYPB-207ENST00000506679 PPP2R3AQ06190 1150 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 ZNF252P-AS1Q0IIN9 211 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 TAF1CQ15572 869 aaPredicted RBP5.02□□□□□ -1.61
GYPB-207ENST00000506679 TPTE2Q6XPS3 522 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 DDX54Q8TDD1 881 aaKnown RBP5.02□□□□□ -1.61
GYPB-207ENST00000506679 STK35Q8TDR2 534 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 NOC4LQ9BVI4 516 aaKnown RBP5.02□□□□□ -1.61
GYPB-207ENST00000506679 TMPRSS13Q9BYE2 586 aa5.02□□□□□ -1.61
GYPB-207ENST00000506679 TTF2Q9UNY4 1162 aaKnown RBP5.02□□□□□ -1.61
GYPB-207ENST00000506679 PROCP04070 461 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 GSTP1P09211 210 aaKnown RBP5.01□□□□□ -1.61
GYPB-207ENST00000506679 NME2P22392 152 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 MAOBP27338 520 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 NOS3P29474 1203 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 POU4F3Q15319 338 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 DUOXA2Q1HG44 320 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 RASIP1Q5U651 963 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 ACAD11Q709F0 780 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 TXNRD3Q86VQ6 643 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 WFDC12Q8WWY7 111 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 MRRFQ96E11 262 aaKnown RBP5.01□□□□□ -1.61
GYPB-207ENST00000506679 SSBP4Q9BWG4 385 aaPredicted RBP5.01□□□□□ -1.61
GYPB-207ENST00000506679 AKTIPQ9H8T0 292 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 SUGCTQ9HAC7 445 aa5.01□□□□□ -1.61
GYPB-207ENST00000506679 SYNGAP1Q96PV0 1343 aa5□□□□□ -1.61
GYPB-207ENST00000506679 ARNTP27540 789 aa5□□□□□ -1.61
GYPB-207ENST00000506679 CCDC85BQ15834 202 aaPredicted RBP5□□□□□ -1.61
GYPB-207ENST00000506679 SCARA3Q6AZY7 606 aa5□□□□□ -1.61
GYPB-207ENST00000506679 SULF2Q8IWU5 870 aa5□□□□□ -1.61
GYPB-207ENST00000506679 DZIP1LQ8IYY4 767 aaKnown RBP5□□□□□ -1.61
GYPB-207ENST00000506679 CORO1BQ9BR76 489 aa5□□□□□ -1.61
GYPB-207ENST00000506679 USP26Q9BXU7 913 aa5□□□□□ -1.61
GYPB-207ENST00000506679 BACH2Q9BYV9 841 aa5□□□□□ -1.61
GYPB-207ENST00000506679 RNF208Q9H0X6 261 aa5□□□□□ -1.61
GYPB-207ENST00000506679 BCL11AQ9H165 835 aa5□□□□□ -1.61
GYPB-207ENST00000506679 KRT82Q9NSB4 513 aa5□□□□□ -1.61
GYPB-207ENST00000506679 USP21Q9UK80 565 aa5□□□□□ -1.61
GYPB-207ENST00000506679 ALX3O95076 343 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 TIAF1O95411 115 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 IREB2P48200 963 aaKnown RBP4.99□□□□□ -1.61
GYPB-207ENST00000506679 RPS26P62854 115 aaKnown RBP4.99□□□□□ -1.61
GYPB-207ENST00000506679 PCNX4Q63HM2 1172 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 ERMP1Q7Z2K6 904 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 AGGF1Q8N302 714 aaeCLIP4.99□□□□□ -1.61
GYPB-207ENST00000506679 SMG8Q8ND04 991 aaKnown RBP4.99□□□□□ -1.61
GYPB-207ENST00000506679 ZNF428Q96B54 188 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 MEGF10Q96KG7 1140 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 RUSC1Q9BVN2 902 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 CCDC86Q9H6F5 360 aaKnown RBP4.99□□□□□ -1.61
GYPB-207ENST00000506679 PCDHGC5Q9Y5F6 944 aa4.99□□□□□ -1.61
GYPB-207ENST00000506679 ZNF862O60290 1169 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 GATA4P43694 442 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 LIG3P49916 1009 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 FANCCQ00597 558 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 KIF4BQ2VIQ3 1234 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 EXOSC6Q5RKV6 272 aaKnown RBP4.98□□□□□ -1.61
GYPB-207ENST00000506679 HP1BP3Q5SSJ5 553 aaPredicted RBP4.98□□□□□ -1.61
GYPB-207ENST00000506679 ANKRD34AQ69YU3 496 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 AGMOQ6ZNB7 445 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 SPOCK3Q9BQ16 436 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 WDR18Q9BV38 432 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms