RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FAM160A1Q05DH4 1040 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 SULF2Q8IWU5 870 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 PHC3Q8NDX5 983 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 ENAMQ9NRM1 1142 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 NID1P14543 1247 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 BMP6P22004 513 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
HERC4-213ENST00000506515 DGKGP49619 791 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 COL9A3Q14050 684 aaPredicted RBP9.39□□□□□ -0.91
HERC4-213ENST00000506515 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 SPON2Q9BUD6 331 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 ADAMTS1Q9UHI8 967 aa9.39□□□□□ -0.91
HERC4-213ENST00000506515 PF4P02776 101 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 TFE3P19532 575 aaPredicted RBP9.38□□□□□ -0.91
HERC4-213ENST00000506515 TRAPPC3LQ5T215 181 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 GRIN3AQ8TCU5 1115 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 RHOVQ96L33 236 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 TINF2Q9BSI4 451 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
HERC4-213ENST00000506515 HOXB4P17483 251 aaPredicted RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 ARNTP27540 789 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 RPS26P62854 115 aaKnown RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 PAK2Q13177 524 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 CAMK2GQ13555 558 aaPredicted RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 GNL2Q13823 731 aaKnown RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 LCE2AQ5TA79 106 aaPredicted RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 KIAA0825Q8IV33 1275 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 WNT8BQ93098 351 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 KLHDC7BQ96G42 594 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 ZC3H12CQ9C0D7 883 aaKnown RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 SOX17Q9H6I2 414 aaPredicted RBP9.37□□□□□ -0.91
HERC4-213ENST00000506515 OSGEPQ9NPF4 335 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 PCDHB5Q9Y5E4 795 aa9.37□□□□□ -0.91
HERC4-213ENST00000506515 AP3B2Q13367 1082 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 SNAP47Q5SQN1 464 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 FBXL19Q6PCT2 694 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 GOLM1Q8NBJ4 401 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 ZNF296Q8WUU4 475 aaPredicted RBP9.36□□□□□ -0.91
HERC4-213ENST00000506515 EMILIN2Q9BXX0 1053 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 CYP8B1Q9UNU6 501 aa9.36□□□□□ -0.91
HERC4-213ENST00000506515 NLRP12P59046 1061 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 SNRPNP63162 240 aaKnown RBP9.35□□□□□ -0.91
HERC4-213ENST00000506515 LMNB2Q03252 620 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 LRRC14Q15048 493 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
HERC4-213ENST00000506515 LLGL2Q6P1M3 1020 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 KLHL23Q8NBE8 558 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 GALNT11Q8NCW6 608 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
HERC4-213ENST00000506515 KCNB2Q92953 911 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 MIR1-1HGQ9H1L0 117 aa9.35□□□□□ -0.91
HERC4-213ENST00000506515 ECEL1O95672 775 aa9.34□□□□□ -0.91
HERC4-213ENST00000506515 CYP11A1P05108 521 aa9.34□□□□□ -0.91
HERC4-213ENST00000506515 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
HERC4-213ENST00000506515 SEPT6Q14141 434 aa9.34□□□□□ -0.91
HERC4-213ENST00000506515 CORO1BQ9BR76 489 aa9.34□□□□□ -0.91
HERC4-213ENST00000506515 SUPT16HQ9Y5B9 1047 aaKnown RBP9.34□□□□□ -0.91
HERC4-213ENST00000506515 DDX3YO15523 660 aaKnown RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 IGSF3O75054 1194 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 DEAF1O75398 565 aaPredicted RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 ARHGEF15O94989 841 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 GARTP22102 1010 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 MAOBP27338 520 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 DNAJA1P31689 397 aaKnown RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 SUZ12Q15022 739 aaKnown RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 POU4F3Q15319 338 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 MPRIPQ6WCQ1 1025 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 BNC2Q6ZN30 1099 aaPredicted RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 PDZD3Q86UT5 571 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 TRIM42Q8IWZ5 723 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 SREK1Q8WXA9 508 aaKnown RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 GPRASP2Q96D09 838 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 USP26Q9BXU7 913 aa9.33□□□□□ -0.92
HERC4-213ENST00000506515 PPP1R1BQ9UD71 204 aaPredicted RBP9.33□□□□□ -0.92
HERC4-213ENST00000506515 ZNF252P-AS1Q0IIN9 211 aa9.32□□□□□ -0.92
HERC4-213ENST00000506515 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
HERC4-213ENST00000506515 MAP4K3Q8IVH8 894 aa9.32□□□□□ -0.92
HERC4-213ENST00000506515 SLC43A3Q8NBI5 491 aa9.32□□□□□ -0.92
HERC4-213ENST00000506515 TRIM11Q96F44 468 aa9.32□□□□□ -0.92
HERC4-213ENST00000506515 EAF1Q96JC9 268 aaPredicted RBP9.32□□□□□ -0.92
HERC4-213ENST00000506515 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
HERC4-213ENST00000506515 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
HERC4-213ENST00000506515 F13A1P00488 732 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
HERC4-213ENST00000506515 GJA8P48165 433 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 LINC00114Q6XXX2 140 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 VPS37DQ86XT2 251 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 NRSN2Q9GZP1 204 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 KCNQ5Q9NR82 932 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 UBP1Q9NZI7 540 aa9.31□□□□□ -0.92
HERC4-213ENST00000506515 A0A0A0MRY4 1105 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 TM4SF5O14894 197 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 TLR3O15455 904 aaKnown RBP9.3□□□□□ -0.92
HERC4-213ENST00000506515 GREM1O60565 184 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 ADAM11O75078 769 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 CTSBP07858 339 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms