RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TBC1D8BQ0IIM8 1120 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 DIEXFQ68CQ4 756 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 AGMOQ6ZNB7 445 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 HFE2Q6ZVN8 426 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 PODNQ7Z5L7 613 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 GOLM1Q8NBJ4 401 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 CPLX3Q8WVH0 158 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 UBE2OQ9C0C9 1292 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 OSBPL2Q9H1P3 480 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 ZNF576Q9H609 170 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 GINM1Q9NU53 330 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 TMEM39AQ9NV64 488 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 TLR6Q9Y2C9 796 aa4.79□□□□□ -1.64
TRAPPC11-205ENST00000506426 TLDC2A0PJX2 215 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 ENC1O14682 589 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 EIF2AK2P19525 551 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 GARTP22102 1010 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 SOX9P48436 509 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 ATP11AP98196 1134 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 CTBSQ01459 385 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 APOBRQ0VD83 1088 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 NFE2L2Q16236 605 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 NBPF6Q5VWK0 638 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 CEP135Q66GS9 1140 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 SYT9Q86SS6 491 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 MICALL1Q8N3F8 863 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 BSNDQ8WZ55 320 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 NKD1Q969G9 470 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 NBPF4Q96M43 638 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 CLEC4MQ9H2X3 399 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 DNAJB12Q9NXW2 375 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 ROBO2Q9HCK4 1378 aa4.78□□□□□ -1.64
TRAPPC11-205ENST00000506426 FAM177BA6PVY3 158 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 SIN3BO75182 1162 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 BMP4P12644 408 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 ZNF157P51786 506 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 FAAP100Q0VG06 881 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 ZNF468Q5VIY5 522 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 PCNX4Q63HM2 1172 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 CCDC84Q86UT8 332 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 KRTAP1-3Q8IUG1 177 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 TRIM42Q8IWZ5 723 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 POP1Q99575 1024 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 MUC3BQ9H195 1237 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 MIR1-1HGQ9H1L0 117 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 PIF1Q9H611 641 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 UBP1Q9NZI7 540 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 CYP8B1Q9UNU6 501 aa4.77□□□□□ -1.65
TRAPPC11-205ENST00000506426 OIP5O43482 229 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 PAGE1O75459 146 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 PTPRAP18433 802 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 NCLP19338 710 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 MX2P20592 715 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 NME2P22392 152 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 ETFBP38117 255 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 LRRC14Q15048 493 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 ELMSAN1Q6PJG2 1045 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 FAM196AQ6ZSG2 479 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 FAM35AQ86V20 835 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 SLITRK4Q8IW52 837 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 DDX54Q8TDD1 881 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 MKL1Q969V6 931 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 PLD4Q96BZ4 506 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 MRFAP1L1Q96HT8 127 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 SRRTQ9BXP5 876 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 ZNF408Q9H9D4 720 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 AVENQ9NQS1 362 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 R3HCC1Q9Y3T6 440 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 MRVI1Q9Y6F6 885 aa4.76□□□□□ -1.65
TRAPPC11-205ENST00000506426 U2SURPO15042 1029 aaKnown RBP4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 B3GALT4O96024 378 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 CPB1P15086 417 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 PCBP4P57723 403 aaKnown RBP4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 PCDH1Q08174 1060 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 BMS1Q14692 1282 aaKnown RBP4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 CWF19L2Q2TBE0 894 aaKnown RBP4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 SEZ6Q53EL9 994 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 ANKS3Q6ZW76 656 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 GATAD2BQ8WXI9 593 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 JARID2Q92833 1246 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 TNFRSF25Q93038 417 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 EMILIN2Q9BXX0 1053 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 TRIM55Q9BYV6 548 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 ADAM19Q9H013 955 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 SIRPGQ9P1W8 387 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 SLC6A14Q9UN76 642 aa4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 CDK11AQ9UQ88 783 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC11-205ENST00000506426 C2CD2LO14523 706 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 TLR3O15455 904 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 F13A1P00488 732 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 BMP6P22004 513 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 ARNTP27540 789 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 ADH6P28332 368 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 MCM4P33991 863 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 CRKP46108 304 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 ZNF165P49910 485 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 CABP4P57796 275 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 MPP2Q14168 576 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 ZNF423Q2M1K9 1284 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms