RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 VAMP4O75379 141 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 WDHD1O75717 1129 aaPredicted RBP10.42□□□□□ -0.74
SNF8-204ENST00000506104 CACNB3P54284 484 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 CCL15Q16663 113 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 MTMR14Q8NCE2 650 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 PUS3Q9BZE2 481 aaKnown RBP10.42□□□□□ -0.74
SNF8-204ENST00000506104 TMEM39BQ9GZU3 492 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 ZFYVE28Q9HCC9 887 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 TMOD2Q9NZR1 351 aa10.42□□□□□ -0.74
SNF8-204ENST00000506104 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
SNF8-204ENST00000506104 IL16Q14005 1332 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 CRKP46108 304 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 FKBP1AP62942 108 aaKnown RBP10.41□□□□□ -0.74
SNF8-204ENST00000506104 KIF22Q14807 665 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 ARHGEF6Q15052 776 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 MAP3K11Q16584 847 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 CCDC27Q2M243 656 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 SLC9C1Q4G0N8 1177 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 METTL24Q5JXM2 366 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 BEND3Q5T5X7 828 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 DZIP1LQ8IYY4 767 aaKnown RBP10.41□□□□□ -0.74
SNF8-204ENST00000506104 CFHR5Q9BXR6 569 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 SRCIN1Q9C0H9 1055 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 SPINK5Q9NQ38 1064 aaPredicted RBP10.41□□□□□ -0.74
SNF8-204ENST00000506104 ZSWIM8A7E2V4 1837 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 ARAP2Q8WZ64 1704 aa10.41□□□□□ -0.74
SNF8-204ENST00000506104 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
SNF8-204ENST00000506104 ZEB1P37275 1124 aaPredicted RBP10.4□□□□□ -0.74
SNF8-204ENST00000506104 GTF2A2P52657 109 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 UBE4AQ14139 1066 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 CAVIN4Q5BKX8 364 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 C15orf52Q6ZUT6 534 aaKnown RBP10.4□□□□□ -0.74
SNF8-204ENST00000506104 NBPF11Q86T75 865 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 FAM9BQ8IZU0 186 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 SUCLG2Q96I99 432 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 PTPN18Q99952 460 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 PTCH2Q9Y6C5 1203 aa10.4□□□□□ -0.74
SNF8-204ENST00000506104 IRS2Q9Y4H2 1338 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 ANP32CO43423 234 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 VGLL4Q14135 290 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 HABP4Q5JVS0 413 aaKnown RBP10.39□□□□□ -0.75
SNF8-204ENST00000506104 TDRD7Q8NHU6 1098 aaKnown RBP10.39□□□□□ -0.75
SNF8-204ENST00000506104 BRI3BPQ8WY22 251 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 FAM84BQ96KN1 310 aaPredicted RBP10.39□□□□□ -0.75
SNF8-204ENST00000506104 WRNIP1Q96S55 665 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 SERPINA10Q9UK55 444 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 LAMB1P07942 1786 aa10.39□□□□□ -0.75
SNF8-204ENST00000506104 RBBP6Q7Z6E9 1792 aaKnown RBP10.39□□□□□ -0.75
SNF8-204ENST00000506104 FAM205AQ6ZU69 1335 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 ALDH1L1O75891 902 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 GRIK5Q16478 980 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.38□□□□□ -0.75
SNF8-204ENST00000506104 MIGA2Q7L4E1 593 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 WDR63Q8IWG1 891 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 FAM43AQ8N2R8 423 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 SH3TC2Q8TF17 1288 aa10.38□□□□□ -0.75
SNF8-204ENST00000506104 ZKSCAN4Q969J2 545 aaPredicted RBP10.38□□□□□ -0.75
SNF8-204ENST00000506104 BIN2Q9UBW5 565 aaPredicted RBP10.38□□□□□ -0.75
SNF8-204ENST00000506104 MROH5Q6ZUA9 1318 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 UNCXA6NJT0 531 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 CETPP11597 493 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
SNF8-204ENST00000506104 LRRC24Q50LG9 513 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 KLHDC4Q8TBB5 520 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 ARHGAP39Q9C0H5 1083 aa10.37□□□□□ -0.75
SNF8-204ENST00000506104 BICC1Q9H694 974 aaKnown RBP10.37□□□□□ -0.75
SNF8-204ENST00000506104 NBPF7P0C2Y1 421 aaPredicted RBP10.36□□□□□ -0.75
SNF8-204ENST00000506104 BCAMP50895 628 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 CAP1Q01518 475 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 TCP10Q12799 353 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.36□□□□□ -0.753e-6■■■■■ 38.3
SNF8-204ENST00000506104 TBC1D22AQ8WUA7 517 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 DPF3Q92784 378 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 ARMC5Q96C12 935 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 TEPSINQ96N21 525 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 CPA4Q9UI42 421 aa10.36□□□□□ -0.75
SNF8-204ENST00000506104 TESPA1A2RU30 521 aaPredicted RBP10.35□□□□□ -0.75
SNF8-204ENST00000506104 BTBD19C9JJ37 291 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 FMNL1O95466 1100 aaPredicted RBP10.35□□□□□ -0.75
SNF8-204ENST00000506104 IFIT1P09914 478 aaKnown RBP10.35□□□□□ -0.75
SNF8-204ENST00000506104 SNAPC2Q13487 334 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 DCAF15Q66K64 600 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 ERO1BQ86YB8 467 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.35□□□□□ -0.75
SNF8-204ENST00000506104 HOOK2Q96ED9 719 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 ZNF333Q96JL9 665 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 SNCAIPQ9Y6H5 919 aa10.35□□□□□ -0.75
SNF8-204ENST00000506104 MAST3O60307 1309 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 SPDYE5A6NIY4 337 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 IRF6O14896 467 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 SLC5A1P13866 664 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 ZNF341Q9BYN7 854 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
SNF8-204ENST00000506104 COLQQ9Y215 455 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms