RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 HACL1Q9UJ83 578 aa9.98□□□□□ -0.81
LIMCH1-206ENST00000505705 TTF2Q9UNY4 1162 aaKnown RBP9.98□□□□□ -0.81
LIMCH1-206ENST00000505705 MAST3O60307 1309 aa9.98□□□□□ -0.81
LIMCH1-206ENST00000505705 PDS5AQ29RF7 1337 aaKnown RBP9.98□□□□□ -0.81
LIMCH1-206ENST00000505705 ARAP2Q8WZ64 1704 aa9.98□□□□□ -0.81
LIMCH1-206ENST00000505705 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 PRDX5P30044 214 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 EPS15P42566 896 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 EAPPQ56P03 285 aaPredicted RBP9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 CERS5Q8N5B7 392 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 RILPL2Q969X0 211 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 HAUS7Q99871 368 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 ANTXR1Q9H6X2 564 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 GPRC5DQ9NZD1 345 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 SUGT1Q9Y2Z0 365 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 SALL1Q9NSC2 1324 aa9.97□□□□□ -0.81
LIMCH1-206ENST00000505705 VEGFAP15692 232 aaPredicted RBP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 PDE4AP27815 886 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 EPHX2P34913 555 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 MMP14P50281 582 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 GSTO1P78417 241 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 MAP3K12Q12852 859 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 DLGAP5Q15398 846 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 TEKT1Q969V4 418 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 NOL10Q9BSC4 688 aaKnown RBP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 ADARB2Q9NS39 739 aaKnown RBP9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 STAP2Q9UGK3 403 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 AOX1Q06278 1338 aa9.96□□□□□ -0.82
LIMCH1-206ENST00000505705 SHTN1A0MZ66 631 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 MYO1BO43795 1136 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 LDHCP07864 332 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 CRKP46108 304 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 MECOMQ03112 1051 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 GRIK5Q16478 980 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 CFAP100Q494V2 611 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 TBC1D10BQ4KMP7 808 aaPredicted RBP9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 ZSCAN25Q6NSZ9 544 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 SAMD7Q7Z3H4 446 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 PNMA8AQ86V59 439 aaPredicted RBP9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 CNTROBQ8N137 903 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 PI4K2BQ8TCG2 481 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 GMLQ99445 158 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 FSD1Q9BTV5 496 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 OSBPL3Q9H4L5 887 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 MYOZ2Q9NPC6 264 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 NMRK2Q9NPI5 230 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 COL1A1P02452 1464 aaPredicted RBP9.95□□□□□ -0.82
LIMCH1-206ENST00000505705 SCN9AQ15858 1988 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 MYH13Q9UKX3 1938 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 SLC9C2Q5TAH2 1124 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 USP50Q70EL3 339 aaPredicted RBP9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 SKAP1Q86WV1 359 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 MAGEB6Q8N7X4 407 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 EVI5LQ96CN4 794 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 TAF1DQ9H5J8 278 aaPredicted RBP9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
LIMCH1-206ENST00000505705 IGSF3O75054 1194 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 BAG3O95817 575 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 CYP7A1P22680 504 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 ZNF280AP59817 542 aaPredicted RBP9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 HDLBPQ00341 1268 aaKnown RBP9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 TTC22Q5TAA0 569 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 HHIPL2Q6UWX4 724 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 KBTBD3Q8NAB2 608 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 NSUN4Q96CB9 384 aaKnown RBP9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 MRIQ9BWK5 157 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
LIMCH1-206ENST00000505705 POTECB2RU33 542 aa9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 WNT10BO00744 389 aa9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 BTDP43251 543 aa9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 ZNF784Q8NCA9 323 aaPredicted RBP9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 TRPM4Q8TD43 1214 aa9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 DCPSQ96C86 337 aaKnown RBP9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 VEZTQ9HBM0 779 aa9.92□□□□□ -0.82
LIMCH1-206ENST00000505705 PSME4Q14997 1843 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 WDR90Q96KV7 1748 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 MROH7-TTC4A0A0A0MT08 1334 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 ZNF532Q9HCE3 1301 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 CLRN2A0PK11 232 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 RNF113AO15541 343 aaKnown RBP9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 EGFRP00533 1210 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 ZFYP08048 801 aaPredicted RBP9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 PDE6AP16499 860 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 NBPF9Q3BBW0 867 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 MIGA1Q8NAN2 632 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 PRMT6Q96LA8 375 aaPredicted RBP9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 ZDHHC15Q96MV8 337 aa9.91□□□□□ -0.82
LIMCH1-206ENST00000505705 TDRD3Q9H7E2 651 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms