RNA–Protein interactions for RNA: ENST00000505280.1

SEC24D-207, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-207ENST00000505280 VPS33BQ9H267 617 aa12.69□□□□□ -0.38
SEC24D-207ENST00000505280 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
SEC24D-207ENST00000505280 A0A1B0GUL7 405 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 FZD9O00144 591 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 SLC5A1P13866 664 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 MLLT3P42568 568 aaPredicted RBP12.68□□□□□ -0.38
SEC24D-207ENST00000505280 HDAC1Q13547 482 aaPredicted RBP12.68□□□□□ -0.38
SEC24D-207ENST00000505280 AAMPQ13685 434 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 LPIN2Q92539 896 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
SEC24D-207ENST00000505280 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 KCNQ5Q9NR82 932 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 PCDH10Q9P2E7 1040 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
SEC24D-207ENST00000505280 ZC3H4Q9UPT8 1303 aaKnown RBP12.67□□□□□ -0.38
SEC24D-207ENST00000505280 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
SEC24D-207ENST00000505280 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
SEC24D-207ENST00000505280 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
SEC24D-207ENST00000505280 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
SEC24D-207ENST00000505280 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
SEC24D-207ENST00000505280 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
SEC24D-207ENST00000505280 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
SEC24D-207ENST00000505280 RAD17O75943 681 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 IGHDP01880 384 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 IFIT1P09914 478 aaKnown RBP12.66□□□□□ -0.38
SEC24D-207ENST00000505280 PHKA1P46020 1223 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 BCAMP50895 628 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 TIMM10P62072 90 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 NBR1Q14596 966 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
SEC24D-207ENST00000505280 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 COA1Q9GZY4 146 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 CD209Q9NNX6 404 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 GPR108Q9NPR9 543 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 JAG2Q9Y219 1238 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
SEC24D-207ENST00000505280 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
SEC24D-207ENST00000505280 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 PSEN2P49810 448 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 EIF6P56537 245 aaKnown RBP12.65□□□□□ -0.38
SEC24D-207ENST00000505280 CXCL9Q07325 125 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 EPAS1Q99814 870 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
SEC24D-207ENST00000505280 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
SEC24D-207ENST00000505280 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
SEC24D-207ENST00000505280 PSMD14O00487 310 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 DDNO94850 711 aaPredicted RBP12.64□□□□□ -0.39
SEC24D-207ENST00000505280 NEFLP07196 543 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 IL1R1P14778 569 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 YY1P25490 414 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
SEC24D-207ENST00000505280 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 AACSQ86V21 672 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
SEC24D-207ENST00000505280 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 AKAP2Q9Y2D5 859 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 CHD4Q14839 1912 aa12.64□□□□□ -0.39
SEC24D-207ENST00000505280 CAVIN4Q5BKX8 364 aa12.63□□□□□ -0.39
SEC24D-207ENST00000505280 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
SEC24D-207ENST00000505280 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
SEC24D-207ENST00000505280 TDRD7Q8NHU6 1098 aaKnown RBP12.63□□□□□ -0.39
SEC24D-207ENST00000505280 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
SEC24D-207ENST00000505280 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
SEC24D-207ENST00000505280 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
SEC24D-207ENST00000505280 GJA3Q9Y6H8 435 aa12.63□□□□□ -0.39
SEC24D-207ENST00000505280 SHTN1A0MZ66 631 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 OSBPP22059 807 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 GTF2IP78347 998 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 SCARF1Q14162 830 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 DACT2Q5SW24 774 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 VPS37DQ86XT2 251 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
SEC24D-207ENST00000505280 PSME4Q14997 1843 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 PBX2P40425 430 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
SEC24D-207ENST00000505280 SCNN1DP51172 638 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 CHAF1AQ13111 956 aaPredicted RBP12.61□□□□□ -0.39
SEC24D-207ENST00000505280 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
SEC24D-207ENST00000505280 PI16Q6UXB8 463 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 GPC2Q8N158 579 aa12.61□□□□□ -0.39
SEC24D-207ENST00000505280 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms