RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 TTF2Q9UNY4 1162 aaKnown RBP15.19■□□□□ 0.02
SNCA-208ENST00000505199 ECM29Q5VYK3 1845 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 MYO1BO43795 1136 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 GSTO1P78417 241 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 FSTL1Q12841 308 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 KIF4BQ2VIQ3 1234 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 ZDHHC15Q96MV8 337 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 MAST2Q6P0Q8 1798 aa15.18■□□□□ 0.02
SNCA-208ENST00000505199 SMARCA5O60264 1052 aaPredicted RBP15.17■□□□□ 0.02
SNCA-208ENST00000505199 CYP2E1P05181 493 aaPredicted RBP15.17■□□□□ 0.02
SNCA-208ENST00000505199 LDHCP07864 332 aa15.17■□□□□ 0.02
SNCA-208ENST00000505199 SCARF1Q14162 830 aa15.17■□□□□ 0.02
SNCA-208ENST00000505199 DLGAP5Q15398 846 aa15.17■□□□□ 0.02
SNCA-208ENST00000505199 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
SNCA-208ENST00000505199 SMC1BQ8NDV3 1235 aa15.17■□□□□ 0.02
SNCA-208ENST00000505199 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
SNCA-208ENST00000505199 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
SNCA-208ENST00000505199 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 WNT10BO00744 389 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 PRDX5P30044 214 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 MAP3K12Q12852 859 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 FKBP1CQ5VVH2 108 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 DZIP1Q86YF9 867 aaKnown RBP15.16■□□□□ 0.02
SNCA-208ENST00000505199 PPP4R2Q9NY27 417 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 ABCF2Q9UG63 623 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 GAKO14976 1311 aa15.16■□□□□ 0.02
SNCA-208ENST00000505199 ZAP70P43403 619 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 CRKP46108 304 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 PDE1AP54750 535 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 PI4K2BQ8TCG2 481 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 NSUN4Q96CB9 384 aaKnown RBP15.15■□□□□ 0.02
SNCA-208ENST00000505199 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNCA-208ENST00000505199 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
SNCA-208ENST00000505199 HIRAP54198 1017 aaPredicted RBP15.14■□□□□ 0.01
SNCA-208ENST00000505199 MECOMQ03112 1051 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 TNFAIP1Q13829 316 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 ZSCAN25Q6NSZ9 544 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 PI16Q6UXB8 463 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 SAMD7Q7Z3H4 446 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
SNCA-208ENST00000505199 LNPKQ9C0E8 428 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 JAG2Q9Y219 1238 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 PPP2R3BQ9Y5P8 575 aa15.14■□□□□ 0.01
SNCA-208ENST00000505199 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
SNCA-208ENST00000505199 PLCG2P16885 1265 aa15.13■□□□□ 0.01
SNCA-208ENST00000505199 TBC1D10BQ4KMP7 808 aaPredicted RBP15.13■□□□□ 0.01
SNCA-208ENST00000505199 EAPPQ56P03 285 aaPredicted RBP15.13■□□□□ 0.01
SNCA-208ENST00000505199 B4GALNT3Q6L9W6 998 aa15.13■□□□□ 0.01
SNCA-208ENST00000505199 CDC37L1Q7L3B6 337 aa15.13■□□□□ 0.01
SNCA-208ENST00000505199 TRPM4Q8TD43 1214 aa15.13■□□□□ 0.01
SNCA-208ENST00000505199 DCPSQ96C86 337 aaKnown RBP15.13■□□□□ 0.01
SNCA-208ENST00000505199 MYH2Q9UKX2 1941 aa15.13■□□□□ 0.01
SNCA-208ENST00000505199 MROH7-TTC4A0A0A0MT08 1334 aa15.13■□□□□ 0.01
SNCA-208ENST00000505199 RFX7Q2KHR2 1363 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 GPR75-ASB3A0A0A6YYF3 556 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
SNCA-208ENST00000505199 BAG3O95817 575 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 ZFYP08048 801 aaPredicted RBP15.12■□□□□ 0.01
SNCA-208ENST00000505199 PPP4CP60510 307 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
SNCA-208ENST00000505199 PLEKHM2Q8IWE5 1019 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 KBTBD3Q8NAB2 608 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 BOLA2Q9H3K6 86 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 SNRKQ9NRH2 765 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
SNCA-208ENST00000505199 SHTN1A0MZ66 631 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 GOLIM4O00461 696 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 EGFRP00533 1210 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 RBM5P52756 815 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNCA-208ENST00000505199 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 GRIK5Q16478 980 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 NAA16Q6N069 864 aaPredicted RBP15.11■□□□□ 0.01
SNCA-208ENST00000505199 TBC1D9Q6ZT07 1266 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 FAM83AQ86UY5 434 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 SULF1Q8IWU6 871 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 EVI5LQ96CN4 794 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 PRMT6Q96LA8 375 aaPredicted RBP15.11■□□□□ 0.01
SNCA-208ENST00000505199 TMOD2Q9NZR1 351 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 DAGLAQ9Y4D2 1042 aa15.11■□□□□ 0.01
SNCA-208ENST00000505199 MYH7P12883 1935 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
SNCA-208ENST00000505199 TNNI2P48788 182 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 NBPF9Q3BBW0 867 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 CNTROBQ8N137 903 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 OTUD7AQ8TE49 926 aaPredicted RBP15.1■□□□□ 0.01
SNCA-208ENST00000505199 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
SNCA-208ENST00000505199 NOL10Q9BSC4 688 aaKnown RBP15.1■□□□□ 0.01
SNCA-208ENST00000505199 IDI2Q9BXS1 227 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 PIH1D3Q9NQM4 214 aaKnown RBP15.1■□□□□ 0.01
SNCA-208ENST00000505199 GGA3Q9NZ52 723 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
SNCA-208ENST00000505199 RPAP1Q9BWH6 1393 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms