RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
DDR1-253ENST00000504651 MICALL2Q8IY33 904 aa16.95■□□□□ 0.3
DDR1-253ENST00000504651 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
DDR1-253ENST00000504651 DPF2Q92785 391 aa16.95■□□□□ 0.3
DDR1-253ENST00000504651 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
DDR1-253ENST00000504651 GPRC5DQ9NZD1 345 aa16.95■□□□□ 0.3
DDR1-253ENST00000504651 ECM29Q5VYK3 1845 aa16.95■□□□□ 0.3
DDR1-253ENST00000504651 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
DDR1-253ENST00000504651 USP17L8P0C7I0 530 aa16.94■□□□□ 0.3
DDR1-253ENST00000504651 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
DDR1-253ENST00000504651 CNOT7Q9UIV1 285 aaKnown RBP16.94■□□□□ 0.3
DDR1-253ENST00000504651 UTRNP46939 3433 aa16.93■□□□□ 0.3
DDR1-253ENST00000504651 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
DDR1-253ENST00000504651 MAP3K12Q12852 859 aa16.93■□□□□ 0.3
DDR1-253ENST00000504651 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
DDR1-253ENST00000504651 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
DDR1-253ENST00000504651 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
DDR1-253ENST00000504651 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 H7C1D1 291 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
DDR1-253ENST00000504651 YY1P25490 414 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 MECOMQ03112 1051 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
DDR1-253ENST00000504651 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.31e-8■■■■■ 50
DDR1-253ENST00000504651 IGSF3O75054 1194 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 EPS15P42566 896 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 CRKP46108 304 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 MMP14P50281 582 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDR1-253ENST00000504651 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
DDR1-253ENST00000504651 GSTO1P78417 241 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 NAA16Q6N069 864 aaPredicted RBP16.91■□□□□ 0.3
DDR1-253ENST00000504651 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 TEKT1Q969V4 418 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 NSUN4Q96CB9 384 aaKnown RBP16.91■□□□□ 0.3
DDR1-253ENST00000504651 MYOZ2Q9NPC6 264 aa16.91■□□□□ 0.3
DDR1-253ENST00000504651 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
DDR1-253ENST00000504651 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 CFAP100Q494V2 611 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 TBC1D10BQ4KMP7 808 aaPredicted RBP16.9■□□□□ 0.3
DDR1-253ENST00000504651 ZSCAN25Q6NSZ9 544 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 MAGEB6Q8N7X4 407 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 ADARB2Q9NS39 739 aaKnown RBP16.9■□□□□ 0.3
DDR1-253ENST00000504651 SERPINA10Q9UK55 444 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 MROH7-TTC4A0A0A0MT08 1334 aa16.9■□□□□ 0.3
DDR1-253ENST00000504651 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.3
DDR1-253ENST00000504651 PDE6AP16499 860 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 EPHX2P34913 555 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 LRRFIP1Q32MZ4 808 aaKnown RBP16.89■□□□□ 0.29
DDR1-253ENST00000504651 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
DDR1-253ENST00000504651 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 RRAGCQ9HB90 399 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
DDR1-253ENST00000504651 POTECB2RU33 542 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 LDHCP07864 332 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 CYP7A1P22680 504 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 ADD2P35612 726 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 TAF1DQ9H5J8 278 aaPredicted RBP16.88■□□□□ 0.29
DDR1-253ENST00000504651 GPBP1L1Q9HC44 474 aaPredicted RBP16.88■□□□□ 0.29
DDR1-253ENST00000504651 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 GAKO14976 1311 aa16.88■□□□□ 0.29
DDR1-253ENST00000504651 EGFRP00533 1210 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 ZFYP08048 801 aaPredicted RBP16.87■□□□□ 0.29
DDR1-253ENST00000504651 VEGFAP15692 232 aaPredicted RBP16.87■□□□□ 0.29
DDR1-253ENST00000504651 SDSP20132 328 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 TMED8Q6PL24 325 aaPredicted RBP16.87■□□□□ 0.29
DDR1-253ENST00000504651 HHIPL2Q6UWX4 724 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 NOL10Q9BSC4 688 aaKnown RBP16.87■□□□□ 0.29
DDR1-253ENST00000504651 PCDHAC2Q9Y5I4 1007 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 ZNF532Q9HCE3 1301 aa16.87■□□□□ 0.29
DDR1-253ENST00000504651 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
DDR1-253ENST00000504651 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
DDR1-253ENST00000504651 BTDP43251 543 aa16.86■□□□□ 0.29
DDR1-253ENST00000504651 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
DDR1-253ENST00000504651 USP50Q70EL3 339 aaPredicted RBP16.86■□□□□ 0.29
DDR1-253ENST00000504651 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
DDR1-253ENST00000504651 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
DDR1-253ENST00000504651 CDK5RAP2Q96SN8 1893 aa16.86■□□□□ 0.29
DDR1-253ENST00000504651 FOCADQ5VW36 1801 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 TCRBV5S4A2TA0A5A2 114 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 WNT10BO00744 389 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 RNF113AO15541 343 aaKnown RBP16.85■□□□□ 0.29
DDR1-253ENST00000504651 MYO1BO43795 1136 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 CHGBP05060 677 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 UBE3CQ15386 1083 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 ADGRA1Q86SQ6 560 aa16.85■□□□□ 0.29
DDR1-253ENST00000504651 PNMA8AQ86V59 439 aaPredicted RBP16.85■□□□□ 0.29
DDR1-253ENST00000504651 FAM163AQ96GL9 167 aaPredicted RBP16.85■□□□□ 0.29
DDR1-253ENST00000504651 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
DDR1-253ENST00000504651 SLFNL1Q499Z3 407 aa16.84■□□□□ 0.29
DDR1-253ENST00000504651 MIGA1Q8NAN2 632 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms