RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 TNP2Q05952 138 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 ZNF468Q5VIY5 522 aaPredicted RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 TMEM214Q6NUQ4 689 aaKnown RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 HDGFL2Q7Z4V5 671 aaPredicted RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 COL23A1Q86Y22 540 aaPredicted RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 TNS4Q8IZW8 715 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 ZCRB1Q8TBF4 217 aaKnown RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 ANKRD24Q8TF21 1146 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 IP6K1Q92551 441 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 PCDHB11Q9Y5F2 797 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 NSD2O96028 1365 aa7.08□□□□□ -1.28
OTUD4-204ENST00000504331 KTN1Q86UP2 1357 aaKnown RBP7.08□□□□□ -1.28
OTUD4-204ENST00000504331 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 MAPTP10636 758 aaKnown RBP7.07□□□□□ -1.28
OTUD4-204ENST00000504331 ATP4AP20648 1035 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 NLGN1Q8N2Q7 840 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 DDX54Q8TDD1 881 aaKnown RBP7.07□□□□□ -1.28
OTUD4-204ENST00000504331 SYTL4Q96C24 671 aaPredicted RBP7.07□□□□□ -1.28
OTUD4-204ENST00000504331 XAGE2Q96GT9 111 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 NACC1Q96RE7 527 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 TERF2IPQ9NYB0 399 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 C10orf71Q711Q0 1435 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 LY75O60449 1722 aa7.07□□□□□ -1.28
OTUD4-204ENST00000504331 FAM208AQ9UK61 1670 aaKnown RBP7.06□□□□□ -1.28
OTUD4-204ENST00000504331 ATXN7O15265 892 aaPredicted RBP7.06□□□□□ -1.28
OTUD4-204ENST00000504331 AP1G2O75843 785 aa7.06□□□□□ -1.28
OTUD4-204ENST00000504331 MBTPS1Q14703 1052 aa7.06□□□□□ -1.28
OTUD4-204ENST00000504331 PPARGC1BQ86YN6 1023 aaKnown RBP7.06□□□□□ -1.28
OTUD4-204ENST00000504331 RHBDD1Q8TEB9 315 aa7.06□□□□□ -1.28
OTUD4-204ENST00000504331 SBNO2Q9Y2G9 1366 aa7.06□□□□□ -1.28
OTUD4-204ENST00000504331 RGPD5Q99666 1765 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 IGSF1Q8N6C5 1336 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 ELOA3CA0A087WX78 387 aaPredicted RBP7.05□□□□□ -1.28
OTUD4-204ENST00000504331 ELOA3DA6NLF2 546 aaPredicted RBP7.05□□□□□ -1.28
OTUD4-204ENST00000504331 USP17L8P0C7I0 530 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 ELNP15502 786 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 ADGRE1Q14246 886 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 ELOA3BQ3SY89 546 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 SMC1BQ8NDV3 1235 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 ELOA3Q8NG57 546 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 AK7Q96M32 723 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 PIK3C2AO00443 1686 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 NFAT5O94916 1531 aa7.05□□□□□ -1.28
OTUD4-204ENST00000504331 USP54Q70EL1 1684 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 HMGB1P09429 215 aaKnown RBP7.04□□□□□ -1.28
OTUD4-204ENST00000504331 FBXO45P0C2W1 286 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 PDE4DQ08499 809 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 RNF20Q5VTR2 975 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 NLRP8Q86W28 1048 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 RAPGEF4Q8WZA2 1011 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 KIF24Q5T7B8 1368 aa7.04□□□□□ -1.28
OTUD4-204ENST00000504331 PCDH11XQ9BZA7 1347 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 PCDH11YQ9BZA8 1340 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 CICQ96RK0 1608 aaPredicted RBP7.03□□□□□ -1.28
OTUD4-204ENST00000504331 ZBBXA8MT70 800 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 TATP17735 454 aaPredicted RBP7.03□□□□□ -1.28
OTUD4-204ENST00000504331 FZD5Q13467 585 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 NBPF1Q3BBV0 1214 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 COL13A1Q5TAT6 717 aaPredicted RBP7.03□□□□□ -1.28
OTUD4-204ENST00000504331 C8orf86Q6ZUL3 223 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 ZNF526Q8TF50 670 aaPredicted RBP7.03□□□□□ -1.28
OTUD4-204ENST00000504331 ARID3AQ99856 593 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.03□□□□□ -1.28
OTUD4-204ENST00000504331 TRIM34Q9BYJ4 488 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 WWC3Q9ULE0 1092 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 STARD13Q9Y3M8 1113 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
OTUD4-204ENST00000504331 MAP3K19Q56UN5 1328 aa7.02□□□□□ -1.28
OTUD4-204ENST00000504331 EDC4Q6P2E9 1401 aaKnown RBP7.02□□□□□ -1.29
OTUD4-204ENST00000504331 M0R082 166 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 KHNYNO15037 678 aaKnown RBP7.02□□□□□ -1.29
OTUD4-204ENST00000504331 SELPP16109 830 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 GTF2E1P29083 439 aaPredicted RBP7.02□□□□□ -1.29
OTUD4-204ENST00000504331 PLA2G4AP47712 749 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 AMPHP49418 695 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 TRIM28Q13263 835 aaKnown RBP7.02□□□□□ -1.29
OTUD4-204ENST00000504331 TBC1D9Q6ZT07 1266 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
OTUD4-204ENST00000504331 ZNF417Q8TAU3 575 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 COG3Q96JB2 828 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 ZNF587Q96SQ5 575 aaPredicted RBP7.02□□□□□ -1.29
OTUD4-204ENST00000504331 PRDM10Q9NQV6 1147 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 PRDM6Q9NQX0 595 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 RNF112Q9ULX5 631 aa7.02□□□□□ -1.29
OTUD4-204ENST00000504331 SMG6Q86US8 1419 aaKnown RBP7.01□□□□□ -1.29
OTUD4-204ENST00000504331 RTL1A6NKG5 1358 aa7.01□□□□□ -1.29
OTUD4-204ENST00000504331 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
OTUD4-204ENST00000504331 NID1P14543 1247 aa7.01□□□□□ -1.29
OTUD4-204ENST00000504331 VEGFAP15692 232 aaPredicted RBP7.01□□□□□ -1.29
OTUD4-204ENST00000504331 TMF1P82094 1093 aa7.01□□□□□ -1.29
OTUD4-204ENST00000504331 ARHGAP27Q6ZUM4 889 aa7.01□□□□□ -1.29
OTUD4-204ENST00000504331 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
OTUD4-204ENST00000504331 PIM2Q9P1W9 311 aa7.01□□□□□ -1.29
OTUD4-204ENST00000504331 WDR90Q96KV7 1748 aa7.01□□□□□ -1.29
OTUD4-204ENST00000504331 CD163L1Q9NR16 1453 aa7□□□□□ -1.29
OTUD4-204ENST00000504331 PALLDQ8WX93 1383 aa7□□□□□ -1.29
OTUD4-204ENST00000504331 ALBP02768 609 aa7□□□□□ -1.29
OTUD4-204ENST00000504331 TRAPPC3LQ5T215 181 aa7□□□□□ -1.29
OTUD4-204ENST00000504331 TXNRD3Q86VQ6 643 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms