RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 BEGAINQ9BUH8 593 aa17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 TDRD3Q9H7E2 651 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 RNF186Q9NXI6 227 aa17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 SLC5A1P13866 664 aa17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 RASA3Q14644 834 aa17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 VPS37DQ86XT2 251 aa17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
PDLIM7-211ENST00000504318 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 RLBP1P12271 317 aa17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 ADORA1P30542 326 aa17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 APOBEC3HQ6NTF7 200 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 ZDHHC15Q96MV8 337 aa17.44■□□□□ 0.38
PDLIM7-211ENST00000504318 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 MYO1BO43795 1136 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 NF2P35240 595 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 PHKA1P46020 1223 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 PRKG1Q13976 671 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 ZKSCAN2Q63HK3 967 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 VEZTQ9HBM0 779 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 CEP126Q9P2H0 1117 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
PDLIM7-211ENST00000504318 USP2O75604 605 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 TM4SF4P48230 202 aa17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 RBM5P52756 815 aaKnown RBP eCLIP17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 POLA2Q14181 598 aa17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 CLMNQ96JQ2 1002 aa17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 SALL1Q9NSC2 1324 aa17.42■□□□□ 0.38
PDLIM7-211ENST00000504318 PRDX5P30044 214 aa17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 GJA5P36382 358 aa17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 SPRYD7Q5W111 196 aa17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 HHIPL2Q6UWX4 724 aa17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 TMEM39BQ9GZU3 492 aa17.41■□□□□ 0.38
PDLIM7-211ENST00000504318 UNCXA6NJT0 531 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 TRPA1O75762 1119 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 GNAI2P04899 355 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 TFCP2Q12800 502 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 TTLL12Q14166 644 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 WDR66Q8TBY9 1149 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 ABHD8Q96I13 439 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 MYH2Q9UKX2 1941 aa17.4■□□□□ 0.38
PDLIM7-211ENST00000504318 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 FRAT2O75474 233 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 CAPN15O75808 1086 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 CACNB3P54284 484 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 TIMM10P62072 90 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 TNFAIP1Q13829 316 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 SUPT20HL1Q3ZLR7 823 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 CFHR5Q9BXR6 569 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 PDS5AQ29RF7 1337 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 RFX7Q2KHR2 1363 aa17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-211ENST00000504318 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 SEMA3EO15041 775 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 FKBP1CQ5VVH2 108 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 MAST3O60307 1309 aa17.38■□□□□ 0.37
PDLIM7-211ENST00000504318 PPP1R12BO60237 982 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 FAM83AQ86UY5 434 aa17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 ZNF384Q8TF68 577 aa17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 R3HDMLQ9H3Y0 253 aa17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
PDLIM7-211ENST00000504318 ZBTB48P10074 688 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-211ENST00000504318 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
PDLIM7-211ENST00000504318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDLIM7-211ENST00000504318 MCOLN1Q9GZU1 580 aa17.36■□□□□ 0.37
PDLIM7-211ENST00000504318 GAKO14976 1311 aa17.36■□□□□ 0.37
PDLIM7-211ENST00000504318 NOM1Q5C9Z4 860 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-211ENST00000504318 CDC42EP5Q6NZY7 148 aa17.35■□□□□ 0.37
PDLIM7-211ENST00000504318 TESPA1A2RU30 521 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 IGF2BP3O00425 579 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 ARID4AP29374 1257 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 NFIAQ12857 509 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 ATRNL1Q5VV63 1379 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 ANKRD13AQ8IZ07 590 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 SLC10A4Q96EP9 437 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 C1orf115Q9H7X2 142 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 FAM198AQ9UFP1 575 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
PDLIM7-211ENST00000504318 MYO5AQ9Y4I1 1855 aaKnown RBP17.33■□□□□ 0.37
PDLIM7-211ENST00000504318 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms