RNA–Protein interactions for RNA: ENST00000504168.5

TSPAN17-205, Transcript of tetraspanin 17, humanhuman

TSL 5

Gene TSPAN17, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-205ENST00000504168 PPP2R3BQ9Y5P8 575 aa29.65■■■□□ 2.34
TSPAN17-205ENST00000504168 ADORA1P30542 326 aa29.64■■■□□ 2.34
TSPAN17-205ENST00000504168 HDLBPQ00341 1268 aaKnown RBP29.64■■■□□ 2.34
TSPAN17-205ENST00000504168 TTLL12Q14166 644 aaPredicted RBP29.64■■■□□ 2.34
TSPAN17-205ENST00000504168 ZNF70Q9UC06 446 aaPredicted RBP29.64■■■□□ 2.34
TSPAN17-205ENST00000504168 TFCP2Q12800 502 aa29.63■■■□□ 2.33
TSPAN17-205ENST00000504168 ITPRIPQ8IWB1 547 aa29.63■■■□□ 2.33
TSPAN17-205ENST00000504168 TNS4Q8IZW8 715 aa29.63■■■□□ 2.33
TSPAN17-205ENST00000504168 TDRD3Q9H7E2 651 aaKnown RBP29.63■■■□□ 2.33
TSPAN17-205ENST00000504168 SUGT1Q9Y2Z0 365 aa29.63■■■□□ 2.33
TSPAN17-205ENST00000504168 PHKA1P46020 1223 aa29.62■■■□□ 2.33
TSPAN17-205ENST00000504168 KIF23Q02241 960 aaPredicted RBP29.62■■■□□ 2.33
TSPAN17-205ENST00000504168 WDR66Q8TBY9 1149 aa29.62■■■□□ 2.33
TSPAN17-205ENST00000504168 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.62■■■□□ 2.33
TSPAN17-205ENST00000504168 PRKG1Q13976 671 aa29.61■■■□□ 2.33
TSPAN17-205ENST00000504168 TEKT1Q969V4 418 aa29.61■■■□□ 2.33
TSPAN17-205ENST00000504168 ZBTB7BO15156 539 aaPredicted RBP29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 TIMM10P62072 90 aa29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 RASA3Q14644 834 aa29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 C1orf115Q9H7X2 142 aa29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 GNL3LQ9NVN8 582 aaKnown RBP29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 TSKSQ9UJT2 592 aa29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 FZD1Q9UP38 647 aa29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 MAST3O60307 1309 aa29.6■■■□□ 2.33
TSPAN17-205ENST00000504168 A0A1B0GUL7 405 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 ZBTB22O15209 634 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 CA12O43570 354 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 POLA2Q14181 598 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 CCDC102BQ68D86 513 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 ARMC9Q7Z3E5 817 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 MRIQ9BWK5 157 aa29.59■■■□□ 2.33
TSPAN17-205ENST00000504168 SEMA3EO15041 775 aa29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 TNFAIP1Q13829 316 aa29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 NBPF12Q5TAG4 269 aaPredicted RBP29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 ZDHHC15Q96MV8 337 aa29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 OTOFQ9HC10 1997 aa29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 ANGEL1Q9UNK9 670 aaKnown RBP29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 AKAP2Q9Y2D5 859 aa29.58■■■□□ 2.33
TSPAN17-205ENST00000504168 CASP8AP2Q9UKL3 1982 aa29.57■■■□□ 2.32
TSPAN17-205ENST00000504168 LDLRAD1Q5T700 205 aa29.57■■■□□ 2.32
TSPAN17-205ENST00000504168 PANK1Q8TE04 598 aa29.57■■■□□ 2.32
TSPAN17-205ENST00000504168 DENND2AQ9ULE3 1009 aa29.57■■■□□ 2.32
TSPAN17-205ENST00000504168 SALL1Q9NSC2 1324 aa29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 ATP8B2P98198 1209 aa29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 G3BP1Q13283 466 aaKnown RBP eCLIP29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 MAP3K11Q16584 847 aa29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 SSH3Q8TE77 659 aa29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 XAGE2Q96GT9 111 aa29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 CSRNP1Q96S65 589 aa29.56■■■□□ 2.32
TSPAN17-205ENST00000504168 MYH2Q9UKX2 1941 aa29.55■■■□□ 2.32
TSPAN17-205ENST00000504168 PRDX5P30044 214 aa29.55■■■□□ 2.32
TSPAN17-205ENST00000504168 SUPT20HL1Q3ZLR7 823 aa29.55■■■□□ 2.32
TSPAN17-205ENST00000504168 APOBEC3HQ6NTF7 200 aaKnown RBP29.55■■■□□ 2.32
TSPAN17-205ENST00000504168 HHIPL2Q6UWX4 724 aa29.55■■■□□ 2.32
TSPAN17-205ENST00000504168 TCP10L2B9ZVM9 353 aa29.54■■■□□ 2.32
TSPAN17-205ENST00000504168 LAMB1P07942 1786 aa29.54■■■□□ 2.32
TSPAN17-205ENST00000504168 PPP1R12BO60237 982 aaPredicted RBP29.53■■■□□ 2.32
TSPAN17-205ENST00000504168 RASGRF1Q13972 1273 aa29.53■■■□□ 2.32
TSPAN17-205ENST00000504168 CDAN1Q8IWY9 1227 aa29.53■■■□□ 2.32
TSPAN17-205ENST00000504168 TEPSINQ96N21 525 aa29.53■■■□□ 2.32
TSPAN17-205ENST00000504168 CACNB3P54284 484 aa29.52■■■□□ 2.32
TSPAN17-205ENST00000504168 MVPQ14764 893 aaKnown RBP29.52■■■□□ 2.32
TSPAN17-205ENST00000504168 NEUROD6Q96NK8 337 aa29.52■■■□□ 2.32
TSPAN17-205ENST00000504168 TMEM39BQ9GZU3 492 aa29.52■■■□□ 2.32
TSPAN17-205ENST00000504168 PDS5AQ29RF7 1337 aaKnown RBP29.51■■■□□ 2.32
TSPAN17-205ENST00000504168 LDHBP07195 334 aaKnown RBP29.51■■■□□ 2.31
TSPAN17-205ENST00000504168 TNNI2P48788 182 aa29.51■■■□□ 2.31
TSPAN17-205ENST00000504168 DIXDC1Q155Q3 683 aa29.51■■■□□ 2.31
TSPAN17-205ENST00000504168 REM2Q8IYK8 340 aaPredicted RBP29.5■■■□□ 2.31
TSPAN17-205ENST00000504168 RNF186Q9NXI6 227 aa29.5■■■□□ 2.31
TSPAN17-205ENST00000504168 SAGE1Q9NXZ1 904 aa29.5■■■□□ 2.31
TSPAN17-205ENST00000504168 RCAN3Q9UKA8 241 aa29.5■■■□□ 2.31
TSPAN17-205ENST00000504168 DAGLAQ9Y4D2 1042 aa29.5■■■□□ 2.31
TSPAN17-205ENST00000504168 USP2O75604 605 aaPredicted RBP29.49■■■□□ 2.31
TSPAN17-205ENST00000504168 MS4A1P11836 297 aa29.49■■■□□ 2.31
TSPAN17-205ENST00000504168 CLMNQ96JQ2 1002 aa29.49■■■□□ 2.31
TSPAN17-205ENST00000504168 TMOD2Q9NZR1 351 aa29.49■■■□□ 2.31
TSPAN17-205ENST00000504168 MKRN3Q13064 507 aaKnown RBP29.48■■■□□ 2.31
TSPAN17-205ENST00000504168 FKBP1CQ5VVH2 108 aa29.48■■■□□ 2.31
TSPAN17-205ENST00000504168 CEP85Q6P2H3 762 aa29.48■■■□□ 2.31
TSPAN17-205ENST00000504168 SURF6O75683 361 aaKnown RBP29.47■■■□□ 2.31
TSPAN17-205ENST00000504168 IREB2P48200 963 aaKnown RBP29.47■■■□□ 2.31
TSPAN17-205ENST00000504168 ZGPATQ8N5A5 531 aaKnown RBP29.47■■■□□ 2.31
TSPAN17-205ENST00000504168 NOP58Q9Y2X3 529 aaKnown RBP29.47■■■□□ 2.31
TSPAN17-205ENST00000504168 UNCXA6NJT0 531 aa29.46■■■□□ 2.31
TSPAN17-205ENST00000504168 TRPA1O75762 1119 aa29.46■■■□□ 2.31
TSPAN17-205ENST00000504168 OS9Q13438 667 aaPredicted RBP29.46■■■□□ 2.31
TSPAN17-205ENST00000504168 SPRYD7Q5W111 196 aa29.46■■■□□ 2.31
TSPAN17-205ENST00000504168 FAM83AQ86UY5 434 aa29.46■■■□□ 2.31
TSPAN17-205ENST00000504168 GPR108Q9NPR9 543 aa29.46■■■□□ 2.31
TSPAN17-205ENST00000504168 AK9Q5TCS8 1911 aa29.45■■■□□ 2.31
TSPAN17-205ENST00000504168 ARID4AP29374 1257 aaPredicted RBP29.45■■■□□ 2.31
TSPAN17-205ENST00000504168 GORABQ5T7V8 394 aa29.45■■■□□ 2.31
TSPAN17-205ENST00000504168 SLC10A4Q96EP9 437 aa29.45■■■□□ 2.31
TSPAN17-205ENST00000504168 RPAP1Q9BWH6 1393 aaPredicted RBP29.44■■■□□ 2.3
TSPAN17-205ENST00000504168 TNNI3KQ59H18 835 aa29.44■■■□□ 2.3
TSPAN17-205ENST00000504168 CDC42EP5Q6NZY7 148 aa29.44■■■□□ 2.3
TSPAN17-205ENST00000504168 HMG20BQ9P0W2 317 aa29.44■■■□□ 2.3
TSPAN17-205ENST00000504168 ABCF2Q9UG63 623 aa29.44■■■□□ 2.3
TSPAN17-205ENST00000504168 FPGT-TNNI3KV9GXZ4 949 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms