RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 AMOTL2Q9Y2J4 779 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 STRCQ7RTU9 1775 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 CCDC196A0A1B0GTZ2 297 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 ARHGAP6O43182 974 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 HOXC9P31274 260 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 NLRP12P59046 1061 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 FANCCQ00597 558 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 RPAINQ86UA6 219 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 ANKRD20A12PQ8NF67 263 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 FAM107BQ9H098 131 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 CCDC8Q9H0W5 538 aaPredicted RBP20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 PCDHA7Q9UN72 937 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 USP54Q70EL1 1684 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 N4BP1O75113 896 aaKnown RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 DNAJC21Q5F1R6 531 aaKnown RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 ILDR1Q86SU0 546 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 ERCC4Q92889 916 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 TLR7Q9NYK1 1049 aaKnown RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 DBF4Q9UBU7 674 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 FBXW7Q969H0 707 aa20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 CARD10Q9BWT7 1032 aa20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.5■□□□□ 0.87
POLR2J3-209ENST00000504157 KSR2Q6VAB6 950 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 EP400NLQ6ZTU2 488 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 TMEM139Q8IV31 216 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 ANKRD65E5RJM6 399 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 MYO1BO43795 1136 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 ERLIN1O75477 346 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 MSANTD4Q8NCY6 345 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 CNNM3Q8NE01 707 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 ANKZF1Q9H8Y5 726 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 SUFUQ9UMX1 484 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 MAP3K2Q9Y2U5 619 aa20.49■□□□□ 0.87
POLR2J3-209ENST00000504157 CYP21A2P08686 494 aa20.48■□□□□ 0.87
POLR2J3-209ENST00000504157 FAM177A1Q8N128 213 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-209ENST00000504157 KCNG4Q8TDN1 519 aa20.48■□□□□ 0.87
POLR2J3-209ENST00000504157 DHX58Q96C10 678 aa20.48■□□□□ 0.87
POLR2J3-209ENST00000504157 CBFA2T2O43439 604 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 ATP5JP18859 108 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 CHMP4BP1P59074 171 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 DHX32Q7L7V1 743 aaKnown RBP20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 KAZALD1Q96I82 304 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 GRM8O00222 908 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 YEATS4O95619 227 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 KCNA6P17658 529 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 NDUFA8P51970 172 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 TUBB4BP68371 445 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 SRGAP1Q7Z6B7 1085 aa20.47■□□□□ 0.87
POLR2J3-209ENST00000504157 HSP90B2PQ58FF3 399 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 LINC00301Q8NCQ3 95 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 LINS1Q8NG48 757 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 SUCLG2Q96I99 432 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 ZNF609O15014 1411 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 SLC3A2P08195 630 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 MICALL1Q8N3F8 863 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 HSD3B7Q9H2F3 369 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 POLR3EQ9NVU0 708 aa20.46■□□□□ 0.87
POLR2J3-209ENST00000504157 VSTM4Q8IW00 320 aa20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 A0A1B0GVL5 298 aa20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 CUTAO60888 179 aa20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 EXOSC10Q01780 885 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 SATB1Q01826 763 aa20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 ZNF274Q96GC6 653 aaPredicted RBP20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 ABCB6Q9NP58 842 aa20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 KCNG1Q9UIX4 513 aa20.45■□□□□ 0.86
POLR2J3-209ENST00000504157 LMOD1P29536 600 aaPredicted RBP20.44■□□□□ 0.86
POLR2J3-209ENST00000504157 UBASH3AP57075 661 aa20.44■□□□□ 0.86
POLR2J3-209ENST00000504157 TICAM2Q86XR7 235 aa20.44■□□□□ 0.86
POLR2J3-209ENST00000504157 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
POLR2J3-209ENST00000504157 BCCIPQ9P287 314 aaKnown RBP eCLIP20.44■□□□□ 0.86
POLR2J3-209ENST00000504157 CARMIL3Q8ND23 1372 aa20.44■□□□□ 0.86
POLR2J3-209ENST00000504157 ERLIN2O94905 339 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 USP8P40818 1118 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 CASP8Q14790 479 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 STOX1Q6ZVD7 989 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 PNKPQ96T60 521 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 MARF1Q9Y4F3 1742 aaKnown RBP20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 ATP1A3P13637 1013 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 FBXL16Q8N461 479 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 KAT2BQ92831 832 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 FAM204AQ9H8W3 233 aa20.43■□□□□ 0.86
POLR2J3-209ENST00000504157 SH3TC1Q8TE82 1336 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 ANXA1P04083 346 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 CEP112Q8N8E3 955 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 ACBD3Q9H3P7 528 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 ANKARQ7Z5J8 1434 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 HEG1Q9ULI3 1381 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 STX10O60499 249 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 TOP1P11387 765 aaKnown RBP20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 HNRNPH1P31943 449 aaKnown RBP20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 CWF19L2Q2TBE0 894 aaKnown RBP20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 DPF2Q92785 391 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 CCDC102AQ96A19 550 aa20.42■□□□□ 0.86
POLR2J3-209ENST00000504157 GBP3Q9H0R5 595 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms