RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 TNIP1Q15025 636 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 DPF2Q92785 391 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
SSBP2-202ENST00000504136 EYA3Q99504 573 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 ADARB2Q9NS39 739 aaKnown RBP11.28□□□□□ -0.6
SSBP2-202ENST00000504136 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
SSBP2-202ENST00000504136 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 NSFL1CQ9UNZ2 370 aaKnown RBP11.28□□□□□ -0.6
SSBP2-202ENST00000504136 XDHP47989 1333 aa11.28□□□□□ -0.6
SSBP2-202ENST00000504136 THSD7BQ9C0I4 1608 aa11.27□□□□□ -0.6
SSBP2-202ENST00000504136 CLCN1P35523 988 aa11.27□□□□□ -0.61
SSBP2-202ENST00000504136 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
SSBP2-202ENST00000504136 GREM2Q9H772 168 aa11.27□□□□□ -0.61
SSBP2-202ENST00000504136 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.61
SSBP2-202ENST00000504136 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
SSBP2-202ENST00000504136 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 CFHP08603 1231 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
SSBP2-202ENST00000504136 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
SSBP2-202ENST00000504136 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 GGA1Q9UJY5 639 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 MINPP1Q9UNW1 487 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 UTYO14607 1347 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 CNTNAP1P78357 1384 aa11.26□□□□□ -0.61
SSBP2-202ENST00000504136 F6X3S4 739 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 ECE2O60344 883 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 RAD17O75943 681 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 UFL1O94874 794 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
SSBP2-202ENST00000504136 CD46P15529 392 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 ATP2B4P23634 1241 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
SSBP2-202ENST00000504136 FOXO4P98177 505 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
SSBP2-202ENST00000504136 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
SSBP2-202ENST00000504136 PTPRCP08575 1304 aa11.25□□□□□ -0.61
SSBP2-202ENST00000504136 TMEM88BA6NKF7 163 aa11.24□□□□□ -0.61
SSBP2-202ENST00000504136 GRM8O00222 908 aa11.24□□□□□ -0.61
SSBP2-202ENST00000504136 PSMD14O00487 310 aa11.24□□□□□ -0.61
SSBP2-202ENST00000504136 CT47B1P0C2W7 299 aaPredicted RBP11.24□□□□□ -0.61
SSBP2-202ENST00000504136 ITGA6P23229 1130 aa11.24□□□□□ -0.61
SSBP2-202ENST00000504136 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
SSBP2-202ENST00000504136 DBNDD1Q9H9R9 158 aa11.24□□□□□ -0.61
SSBP2-202ENST00000504136 IRS2Q9Y4H2 1338 aa11.24□□□□□ -0.61
SSBP2-202ENST00000504136 RASSF10A6NK89 507 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 ACTN4O43707 911 aaKnown RBP11.23□□□□□ -0.61
SSBP2-202ENST00000504136 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-202ENST00000504136 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 MAP1SQ66K74 1059 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-202ENST00000504136 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
SSBP2-202ENST00000504136 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 CCDC85AQ96PX6 553 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-202ENST00000504136 GMLQ99445 158 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 CNOT7Q9UIV1 285 aaKnown RBP11.23□□□□□ -0.61
SSBP2-202ENST00000504136 LEMD3Q9Y2U8 911 aa11.23□□□□□ -0.61
SSBP2-202ENST00000504136 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
SSBP2-202ENST00000504136 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
SSBP2-202ENST00000504136 TJAP1Q5JTD0 557 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 AGBL3Q8NEM8 1001 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 TRPM4Q8TD43 1214 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 SSH1Q8WYL5 1049 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 GPR101Q96P66 508 aaPredicted RBP11.22□□□□□ -0.61
SSBP2-202ENST00000504136 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 KCNQ5Q9NR82 932 aa11.22□□□□□ -0.61
SSBP2-202ENST00000504136 GCGRP47871 477 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-202ENST00000504136 PDE4DQ08499 809 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 TTLL12Q14166 644 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-202ENST00000504136 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-202ENST00000504136 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 ANKRD2Q9GZV1 360 aa11.21□□□□□ -0.61
SSBP2-202ENST00000504136 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 ANKRD18BA2A2Z9 1011 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
SSBP2-202ENST00000504136 H7C1D1 291 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 MMP14P50281 582 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 IFIT5Q13325 482 aaKnown RBP11.2□□□□□ -0.62
SSBP2-202ENST00000504136 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 CST9Q5W186 159 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
SSBP2-202ENST00000504136 COA1Q9GZY4 146 aa11.2□□□□□ -0.62
SSBP2-202ENST00000504136 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
SSBP2-202ENST00000504136 ZNF804BA4D1E1 1349 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
SSBP2-202ENST00000504136 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms