RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 SUPT20HL1Q3ZLR7 823 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 TEPSINQ96N21 525 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 SRCIN1Q9C0H9 1055 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 CNNM1Q9NRU3 951 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 C9orf78Q9NZ63 289 aaPredicted RBP11.38□□□□□ -0.59
PROM1-204ENST00000503884 SERPINA10Q9UK55 444 aa11.38□□□□□ -0.59
PROM1-204ENST00000503884 PLIN1O60240 522 aa11.37□□□□□ -0.59
PROM1-204ENST00000503884 HIBADHP31937 336 aaKnown RBP11.37□□□□□ -0.59
PROM1-204ENST00000503884 GYG1P46976 350 aa11.37□□□□□ -0.59
PROM1-204ENST00000503884 MFSD14BQ5SR56 506 aa11.37□□□□□ -0.59
PROM1-204ENST00000503884 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
PROM1-204ENST00000503884 ANKRD44Q8N8A2 993 aa11.37□□□□□ -0.59
PROM1-204ENST00000503884 VEZTQ9HBM0 779 aa11.37□□□□□ -0.59
PROM1-204ENST00000503884 ZNF70Q9UC06 446 aaPredicted RBP11.37□□□□□ -0.59
PROM1-204ENST00000503884 KIAA0100Q14667 2235 aaKnown RBP11.37□□□□□ -0.59
PROM1-204ENST00000503884 MROH5Q6ZUA9 1318 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 IREB2P48200 963 aaKnown RBP11.36□□□□□ -0.59
PROM1-204ENST00000503884 GRIK5Q16478 980 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 CDAN1Q8IWY9 1227 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 ANKRD13AQ8IZ07 590 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 PTPN18Q99952 460 aa11.36□□□□□ -0.59
PROM1-204ENST00000503884 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
PROM1-204ENST00000503884 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
PROM1-204ENST00000503884 MYH13Q9UKX3 1938 aa11.35□□□□□ -0.59
PROM1-204ENST00000503884 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
PROM1-204ENST00000503884 TNFAIP1Q13829 316 aa11.35□□□□□ -0.59
PROM1-204ENST00000503884 SLC4A10Q6U841 1118 aa11.35□□□□□ -0.59
PROM1-204ENST00000503884 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.35□□□□□ -0.59
PROM1-204ENST00000503884 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
PROM1-204ENST00000503884 DZIP1LQ8IYY4 767 aaKnown RBP11.35□□□□□ -0.59
PROM1-204ENST00000503884 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
PROM1-204ENST00000503884 MS4A4AQ96JQ5 239 aa11.35□□□□□ -0.59
PROM1-204ENST00000503884 BICC1Q9H694 974 aaKnown RBP11.35□□□□□ -0.59
PROM1-204ENST00000503884 PDE8BO95263 885 aa11.34□□□□□ -0.59
PROM1-204ENST00000503884 CRKP46108 304 aa11.34□□□□□ -0.59
PROM1-204ENST00000503884 RBM5P52756 815 aaKnown RBP eCLIP11.34□□□□□ -0.59
PROM1-204ENST00000503884 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
PROM1-204ENST00000503884 CAP1Q01518 475 aa11.34□□□□□ -0.59
PROM1-204ENST00000503884 CRHR2Q13324 411 aa11.34□□□□□ -0.59
PROM1-204ENST00000503884 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
PROM1-204ENST00000503884 PRPF38BQ5VTL8 546 aaKnown RBP11.34□□□□□ -0.59
PROM1-204ENST00000503884 MRIQ9BWK5 157 aa11.34□□□□□ -0.59
PROM1-204ENST00000503884 FGFR2P21802 821 aa11.33□□□□□ -0.6
PROM1-204ENST00000503884 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.33□□□□□ -0.6
PROM1-204ENST00000503884 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
PROM1-204ENST00000503884 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
PROM1-204ENST00000503884 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
PROM1-204ENST00000503884 PTPRCP08575 1304 aa11.33□□□□□ -0.6
PROM1-204ENST00000503884 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
PROM1-204ENST00000503884 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
PROM1-204ENST00000503884 OTUD7BQ6GQQ9 843 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 OPTNQ96CV9 577 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 ERO1AQ96HE7 468 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 TMEM39BQ9GZU3 492 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 ELP3Q9H9T3 547 aa11.32□□□□□ -0.6
PROM1-204ENST00000503884 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 BCAMP50895 628 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 VGLL4Q14135 290 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 INTS3Q68E01 1043 aaKnown RBP11.31□□□□□ -0.6
PROM1-204ENST00000503884 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 ARMC5Q96C12 935 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 IQSEC3Q9UPP2 1182 aaPredicted RBP11.31□□□□□ -0.6
PROM1-204ENST00000503884 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
PROM1-204ENST00000503884 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
PROM1-204ENST00000503884 SPDYE5A6NIY4 337 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 TNNI2P48788 182 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 SP3Q02447 781 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
PROM1-204ENST00000503884 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
PROM1-204ENST00000503884 PCDH10Q9P2E7 1040 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 SNCAIPQ9Y6H5 919 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 ZSWIM8A7E2V4 1837 aa11.3□□□□□ -0.6
PROM1-204ENST00000503884 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 E9PSI1 815 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 GTF2A2P52657 109 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 CACNB3P54284 484 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 SLFN5Q08AF3 891 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 CHAF1AQ13111 956 aaPredicted RBP11.29□□□□□ -0.6
PROM1-204ENST00000503884 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
PROM1-204ENST00000503884 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 VPS37DQ86XT2 251 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 EFCC1Q9HA90 598 aa11.29□□□□□ -0.6
PROM1-204ENST00000503884 CCL15-CCL14A0A0B4J2E2 113 aa11.28□□□□□ -0.6
PROM1-204ENST00000503884 EYA2O00167 538 aa11.28□□□□□ -0.6
PROM1-204ENST00000503884 CCL15Q16663 113 aa11.28□□□□□ -0.6
PROM1-204ENST00000503884 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms