RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-218	ENST00000503547	TNNI2	P48788	182 aa		11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	SP3	Q02447	781 aa		11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	SPDYE2	Q495Y8	402 aa		11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	TDRD3	Q9H7E2	651 aa	Known RBP	11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	ZNF70	Q9UC06	446 aa	Predicted RBP	11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	SERPINA10	Q9UK55	444 aa		11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	PTPN22	Q9Y2R2	807 aa		11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	FAM205A	Q6ZU69	1335 aa		11.25	□□□□□ -0.61
NR1I3-218	ENST00000503547	CRK	P46108	304 aa		11.24	□□□□□ -0.61
NR1I3-218	ENST00000503547	CHAF1A	Q13111	956 aa	Predicted RBP	11.24	□□□□□ -0.61
NR1I3-218	ENST00000503547	UBE4A	Q14139	1066 aa		11.24	□□□□□ -0.61
NR1I3-218	ENST00000503547	WDR63	Q8IWG1	891 aa		11.24	□□□□□ -0.61
NR1I3-218	ENST00000503547	DZIP1L	Q8IYY4	767 aa	Known RBP	11.24	□□□□□ -0.61
NR1I3-218	ENST00000503547	CSAD	Q9Y600	493 aa		11.24	□□□□□ -0.61
NR1I3-218	ENST00000503547	CCL15-CCL14	A0A0B4J2E2	113 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	WDHD1	O75717	1129 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	VGLL4	Q14135	290 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	ARHGEF6	Q15052	776 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	TAF1C	Q15572	869 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	CCL15	Q16663	113 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	CDAN1	Q8IWY9	1227 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	TDRD7	Q8NHU6	1098 aa	Known RBP	11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	OTUD5	Q96G74	571 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	PTPN18	Q99952	460 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	TMEM106C	Q9BVX2	250 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	SRCIN1	Q9C0H9	1055 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	TMEM39B	Q9GZU3	492 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	ZFYVE28	Q9HCC9	887 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	TRIOBP	Q9H2D6	2365 aa		11.23	□□□□□ -0.61
NR1I3-218	ENST00000503547	MGAM	O43451	1857 aa		11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	ALDH1L1	O75891	902 aa		11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	GTF2A2	P52657	109 aa		11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	SLC9C1	Q4G0N8	1177 aa		11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	FAM84B	Q96KN1	310 aa	Predicted RBP	11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	PUS3	Q9BZE2	481 aa	Known RBP	11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	TMOD2	Q9NZR1	351 aa		11.22	□□□□□ -0.61
NR1I3-218	ENST00000503547	MROH5	Q6ZUA9	1318 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	TESPA1	A2RU30	521 aa	Predicted RBP	11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	MYC	P01106	439 aa	Predicted RBP	11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	EN2	P19622	333 aa	Predicted RBP	11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	CACNB3	P54284	484 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	MAP3K9	P80192	1104 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	SLC4A8	Q2Y0W8	1093 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	CAVIN4	Q5BKX8	364 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	METTL24	Q5JXM2	366 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	NBPF11	Q86T75	865 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	BRI3BP	Q8WY22	251 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	TEKT1	Q969V4	418 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	ARMC5	Q96C12	935 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	SUCLG2	Q96I99	432 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	TEPSIN	Q96N21	525 aa		11.21	□□□□□ -0.61
NR1I3-218	ENST00000503547	MYH2	Q9UKX2	1941 aa		11.21	□□□□□ -0.62
NR1I3-218	ENST00000503547	DOCK2	Q92608	1830 aa		11.21	□□□□□ -0.62
NR1I3-218	ENST00000503547	ANP32C	O43423	234 aa		11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	ECM2	O94769	699 aa	Predicted RBP	11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	HOXD11	P31277	338 aa	Predicted RBP	11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	KIF22	Q14807	665 aa		11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	HABP4	Q5JVS0	413 aa	Known RBP	11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	TBC1D22A	Q8WUA7	517 aa		11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	MS4A4A	Q96JQ5	239 aa		11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	WRNIP1	Q96S55	665 aa		11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	PTCH2	Q9Y6C5	1203 aa		11.2	□□□□□ -0.62
NR1I3-218	ENST00000503547	MAST3	O60307	1309 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	CAP1	Q01518	475 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	GRIK5	Q16478	980 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	FAM43A	Q8N2R8	423 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	HOOK2	Q96ED9	719 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	ZNF333	Q96JL9	665 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	BICC1	Q9H694	974 aa	Known RBP	11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	RIPOR2	Q9Y4F9	1068 aa		11.19	□□□□□ -0.62
NR1I3-218	ENST00000503547	SPDYE5	A6NIY4	337 aa		11.18	□□□□□ -0.62
NR1I3-218	ENST00000503547	CETP	P11597	493 aa		11.18	□□□□□ -0.62
NR1I3-218	ENST00000503547	SNAPC2	Q13487	334 aa		11.18	□□□□□ -0.62
NR1I3-218	ENST00000503547	LRRC24	Q50LG9	513 aa		11.18	□□□□□ -0.62
NR1I3-218	ENST00000503547	DCAF15	Q66K64	600 aa		11.18	□□□□□ -0.62
NR1I3-218	ENST00000503547	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.18	□□□□□ -0.62
NR1I3-218	ENST00000503547	ZEB1	P37275	1124 aa	Predicted RBP	11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	BCAM	P50895	628 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	HDLBP	Q00341	1268 aa	Known RBP	11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	FBXO33	Q7Z6M2	555 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	ERO1B	Q86YB8	467 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	FAM9B	Q8IZU0	186 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	SH3TC2	Q8TF17	1288 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	KAZALD1	Q96I82	304 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	ZDHHC15	Q96MV8	337 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	SNCAIP	Q9Y6H5	919 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	PTPRF	P10586	1907 aa		11.17	□□□□□ -0.62
NR1I3-218	ENST00000503547	BTBD19	C9JJ37	291 aa		11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	IRF6	O14896	467 aa		11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	TLR2	O60603	784 aa		11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	PDE8B	O95263	885 aa		11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	IFIT1	P09914	478 aa	Known RBP	11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	LACTB	P83111	547 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	PUM3	Q15397	648 aa	Known RBP	11.16	□□□□□ -0.62
NR1I3-218	ENST00000503547	FAM83A	Q86UY5	434 aa		11.16	□□□□□ -0.62

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