RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 WNT10BO00744 389 aa20.15■□□□□ 0.82
SCLT1-205ENST00000503401 CYP2E1P05181 493 aaPredicted RBP20.15■□□□□ 0.82
SCLT1-205ENST00000503401 CHADLQ6NUI6 762 aa20.15■□□□□ 0.82
SCLT1-205ENST00000503401 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
SCLT1-205ENST00000503401 SCAF8Q9UPN6 1271 aaKnown RBP20.15■□□□□ 0.82
SCLT1-205ENST00000503401 MYH2Q9UKX2 1941 aa20.15■□□□□ 0.82
SCLT1-205ENST00000503401 CRKP46108 304 aa20.14■□□□□ 0.81
SCLT1-205ENST00000503401 DLGAP5Q15398 846 aa20.14■□□□□ 0.81
SCLT1-205ENST00000503401 DIXDC1Q155Q3 683 aa20.14■□□□□ 0.81
SCLT1-205ENST00000503401 ZGPATQ8N5A5 531 aaKnown RBP20.14■□□□□ 0.81
SCLT1-205ENST00000503401 SMC1BQ8NDV3 1235 aa20.14■□□□□ 0.81
SCLT1-205ENST00000503401 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
SCLT1-205ENST00000503401 SUGT1Q9Y2Z0 365 aa20.14■□□□□ 0.81
SCLT1-205ENST00000503401 PRMT6Q96LA8 375 aaPredicted RBP20.13■□□□□ 0.81
SCLT1-205ENST00000503401 DNAJC2Q99543 621 aaKnown RBP20.13■□□□□ 0.81
SCLT1-205ENST00000503401 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 SERPINA10Q9UK55 444 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 ECM29Q5VYK3 1845 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 MMP14P50281 582 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 DZIP1Q86YF9 867 aaKnown RBP20.13■□□□□ 0.81
SCLT1-205ENST00000503401 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
SCLT1-205ENST00000503401 PIH1D3Q9NQM4 214 aaKnown RBP20.13■□□□□ 0.81
SCLT1-205ENST00000503401 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
SCLT1-205ENST00000503401 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 ATP5JP18859 108 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
SCLT1-205ENST00000503401 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 TEKT1Q969V4 418 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
SCLT1-205ENST00000503401 RAI14Q9P0K7 980 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 LRP2BPQ9P2M1 347 aa20.12■□□□□ 0.81
SCLT1-205ENST00000503401 MAST3O60307 1309 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 NUCB1Q02818 461 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 MECOMQ03112 1051 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 SPTY2D1Q68D10 685 aaPredicted RBP20.11■□□□□ 0.81
SCLT1-205ENST00000503401 DLK2Q6UY11 383 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 MTMR14Q8NCE2 650 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
SCLT1-205ENST00000503401 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
SCLT1-205ENST00000503401 CLRN2A0PK11 232 aa20.1■□□□□ 0.81
SCLT1-205ENST00000503401 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.813e-7■■■■□ 25.7
SCLT1-205ENST00000503401 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
SCLT1-205ENST00000503401 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.1■□□□□ 0.812e-6■■□□□ 12.4
SCLT1-205ENST00000503401 GPATCH3Q96I76 525 aa20.1■□□□□ 0.81
SCLT1-205ENST00000503401 GLIS2Q9BZE0 524 aaPredicted RBP20.1■□□□□ 0.81
SCLT1-205ENST00000503401 DOCK2Q92608 1830 aa20.1■□□□□ 0.81
SCLT1-205ENST00000503401 GOLIM4O00461 696 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 MX1P20591 662 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 C1QTNF8P60827 252 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 HDLBPQ00341 1268 aaKnown RBP20.09■□□□□ 0.81
SCLT1-205ENST00000503401 FSTL1Q12841 308 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 DCPSQ96C86 337 aaKnown RBP20.09■□□□□ 0.81
SCLT1-205ENST00000503401 DAGLAQ9Y4D2 1042 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 SALL3Q9BXA9 1300 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 TRAF5O00463 557 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
SCLT1-205ENST00000503401 NSUN4Q96CB9 384 aaKnown RBP20.09■□□□□ 0.81
SCLT1-205ENST00000503401 ZDHHC15Q96MV8 337 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 HAUS7Q99871 368 aa20.09■□□□□ 0.81
SCLT1-205ENST00000503401 TDRD3Q9H7E2 651 aaKnown RBP20.09■□□□□ 0.81
SCLT1-205ENST00000503401 MAST2Q6P0Q8 1798 aa20.08■□□□□ 0.81
SCLT1-205ENST00000503401 ADM5C9JUS6 153 aa20.08■□□□□ 0.8
SCLT1-205ENST00000503401 ITGBL1O95965 494 aaPredicted RBP20.08■□□□□ 0.8
SCLT1-205ENST00000503401 APOBEC3HQ6NTF7 200 aaKnown RBP20.08■□□□□ 0.8
SCLT1-205ENST00000503401 HHIPL2Q6UWX4 724 aa20.08■□□□□ 0.8
SCLT1-205ENST00000503401 KRT26Q7Z3Y9 468 aa20.08■□□□□ 0.8
SCLT1-205ENST00000503401 USP48Q86UV5 1035 aa20.08■□□□□ 0.8
SCLT1-205ENST00000503401 MRIQ9BWK5 157 aa20.08■□□□□ 0.8
SCLT1-205ENST00000503401 CEP350Q5VT06 3117 aa20.08■□□□□ 0.8
SCLT1-205ENST00000503401 PI4K2BQ8TCG2 481 aa20.07■□□□□ 0.8
SCLT1-205ENST00000503401 VEZTQ9HBM0 779 aa20.07■□□□□ 0.8
SCLT1-205ENST00000503401 PAG1Q9NWQ8 432 aa20.07■□□□□ 0.8
SCLT1-205ENST00000503401 MYO1BO43795 1136 aa20.06■□□□□ 0.8
SCLT1-205ENST00000503401 MAP4K4O95819 1239 aaPredicted RBP20.06■□□□□ 0.8
SCLT1-205ENST00000503401 ZNF70Q9UC06 446 aaPredicted RBP20.06■□□□□ 0.8
SCLT1-205ENST00000503401 TTC41PQ6P2S7 1318 aa20.06■□□□□ 0.8
SCLT1-205ENST00000503401 CACNB3P54284 484 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 SPDYE2Q495Y8 402 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 NAA16Q6N069 864 aaPredicted RBP20.05■□□□□ 0.8
SCLT1-205ENST00000503401 CDC37L1Q7L3B6 337 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 SULF1Q8IWU6 871 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 GAKO14976 1311 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 PDE1AP54750 535 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 TTF1Q15361 905 aaPredicted RBP20.05■□□□□ 0.8
SCLT1-205ENST00000503401 ADGRA1Q86SQ6 560 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 CCDC136Q96JN2 1154 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 MROH7-TTC4A0A0A0MT08 1334 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 PITPNM2Q9BZ72 1349 aa20.05■□□□□ 0.8
SCLT1-205ENST00000503401 MYH7P12883 1935 aa20.04■□□□□ 0.8
SCLT1-205ENST00000503401 PRAMEF18Q5VWM3 479 aa20.04■□□□□ 0.8
SCLT1-205ENST00000503401 SLF2Q8IX21 1173 aa20.04■□□□□ 0.8
SCLT1-205ENST00000503401 MAGEB6Q8N7X4 407 aa20.04■□□□□ 0.8
SCLT1-205ENST00000503401 PASKQ96RG2 1323 aa20.04■□□□□ 0.8
SCLT1-205ENST00000503401 TRPM7Q96QT4 1865 aa20.03■□□□□ 0.8
SCLT1-205ENST00000503401 ERC2O15083 957 aa20.03■□□□□ 0.8
SCLT1-205ENST00000503401 GLRX3O76003 335 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms