RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 USP21Q9UK80 565 aa9.91□□□□□ -0.82
NIPBL-203ENST00000503274 ZNF157P51786 506 aaPredicted RBP9.9□□□□□ -0.82
NIPBL-203ENST00000503274 NLRP12P59046 1061 aa9.9□□□□□ -0.82
NIPBL-203ENST00000503274 ANKRD24Q8TF21 1146 aa9.9□□□□□ -0.82
NIPBL-203ENST00000503274 TMEM39AQ9NV64 488 aa9.9□□□□□ -0.82
NIPBL-203ENST00000503274 VTI1BQ9UEU0 232 aa9.9□□□□□ -0.82
NIPBL-203ENST00000503274 C1QTNF9BB2RNN3 333 aa9.89□□□□□ -0.83
NIPBL-203ENST00000503274 PPP2R3AQ06190 1150 aa9.89□□□□□ -0.83
NIPBL-203ENST00000503274 DUOXA2Q1HG44 320 aa9.89□□□□□ -0.83
NIPBL-203ENST00000503274 CD163Q86VB7 1156 aa9.89□□□□□ -0.83
NIPBL-203ENST00000503274 CEP44Q9C0F1 390 aa9.89□□□□□ -0.83
NIPBL-203ENST00000503274 CHRNA4P43681 627 aa9.88□□□□□ -0.83
NIPBL-203ENST00000503274 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
NIPBL-203ENST00000503274 TMEM130Q8N3G9 435 aa9.88□□□□□ -0.83
NIPBL-203ENST00000503274 TTF2Q9UNY4 1162 aaKnown RBP9.88□□□□□ -0.83
NIPBL-203ENST00000503274 WISP1O95388 367 aa9.87□□□□□ -0.83
NIPBL-203ENST00000503274 CYP11A1P05108 521 aa9.87□□□□□ -0.83
NIPBL-203ENST00000503274 NECAB3Q96P71 396 aaPredicted RBP9.87□□□□□ -0.83
NIPBL-203ENST00000503274 TRIM56Q9BRZ2 755 aaKnown RBP9.87□□□□□ -0.83
NIPBL-203ENST00000503274 FBXO24O75426 580 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 CTSHP09668 335 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 AP3B2Q13367 1082 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 MRPL58Q14197 206 aaKnown RBP9.86□□□□□ -0.83
NIPBL-203ENST00000503274 ADGRE1Q14246 886 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 ACAD11Q709F0 780 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.86□□□□□ -0.83
NIPBL-203ENST00000503274 UBASH3BQ8TF42 649 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 CRELD1Q96HD1 420 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 USP26Q9BXU7 913 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 NRSN2Q9GZP1 204 aa9.86□□□□□ -0.83
NIPBL-203ENST00000503274 F8W735 103 aaPredicted RBP9.85□□□□□ -0.83
NIPBL-203ENST00000503274 MBTPS1Q14703 1052 aa9.85□□□□□ -0.83
NIPBL-203ENST00000503274 POU4F3Q15319 338 aa9.85□□□□□ -0.83
NIPBL-203ENST00000503274 MEI1Q5TIA1 1274 aa9.85□□□□□ -0.83
NIPBL-203ENST00000503274 AKTIPQ9H8T0 292 aa9.85□□□□□ -0.83
NIPBL-203ENST00000503274 LOC100289279A0A1B0GTE1 492 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 ENC1O14682 589 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 MAOBP27338 520 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 TAF1CQ15572 869 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-203ENST00000503274 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 CORO1BQ9BR76 489 aa9.84□□□□□ -0.83
NIPBL-203ENST00000503274 ADAM23O75077 832 aa9.83□□□□□ -0.84
NIPBL-203ENST00000503274 ALX3O95076 343 aa9.83□□□□□ -0.84
NIPBL-203ENST00000503274 IREB2P48200 963 aaKnown RBP9.83□□□□□ -0.84
NIPBL-203ENST00000503274 TXNRD3Q86VQ6 643 aa9.83□□□□□ -0.84
NIPBL-203ENST00000503274 AGGF1Q8N302 714 aaeCLIP9.83□□□□□ -0.848e-6■□□□□ 8.6
NIPBL-203ENST00000503274 RUSC1Q9BVN2 902 aa9.83□□□□□ -0.84
NIPBL-203ENST00000503274 NOS3P29474 1203 aa9.82□□□□□ -0.84
NIPBL-203ENST00000503274 ST13P50502 369 aaKnown RBP9.82□□□□□ -0.84
NIPBL-203ENST00000503274 SULF2Q8IWU5 870 aa9.82□□□□□ -0.84
NIPBL-203ENST00000503274 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
NIPBL-203ENST00000503274 MEGF11A6BM72 1044 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 DLGAP3O95886 979 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 CELA3AP09093 270 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 NME2P22392 152 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 ARNTP27540 789 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 GATA4P43694 442 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 CCDC85BQ15834 202 aaPredicted RBP9.81□□□□□ -0.84
NIPBL-203ENST00000503274 EXOSC6Q5RKV6 272 aaKnown RBP9.81□□□□□ -0.84
NIPBL-203ENST00000503274 RNF208Q9H0X6 261 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 SAMM50Q9Y512 469 aa9.81□□□□□ -0.84
NIPBL-203ENST00000503274 PAGE1O75459 146 aa9.8□□□□□ -0.84
NIPBL-203ENST00000503274 ECEL1O95672 775 aa9.8□□□□□ -0.84
NIPBL-203ENST00000503274 CTSBP07858 339 aa9.8□□□□□ -0.84
NIPBL-203ENST00000503274 GSTP1P09211 210 aaKnown RBP9.8□□□□□ -0.84
NIPBL-203ENST00000503274 HP1BP3Q5SSJ5 553 aaPredicted RBP9.8□□□□□ -0.84
NIPBL-203ENST00000503274 STK35Q8TDR2 534 aa9.8□□□□□ -0.84
NIPBL-203ENST00000503274 EMILIN2Q9BXX0 1053 aa9.8□□□□□ -0.84
NIPBL-203ENST00000503274 BMP6P22004 513 aa9.79□□□□□ -0.84
NIPBL-203ENST00000503274 MRRFQ96E11 262 aaKnown RBP9.79□□□□□ -0.84
NIPBL-203ENST00000503274 TMPRSS13Q9BYE2 586 aa9.79□□□□□ -0.84
NIPBL-203ENST00000503274 VAMP1P23763 118 aa9.78□□□□□ -0.84
NIPBL-203ENST00000503274 NUTM2GQ5VZR2 741 aa9.78□□□□□ -0.84
NIPBL-203ENST00000503274 Q6ZS46 218 aa9.78□□□□□ -0.84
NIPBL-203ENST00000503274 PDZD3Q86UT5 571 aa9.78□□□□□ -0.84
NIPBL-203ENST00000503274 NOC4LQ9BVI4 516 aaKnown RBP9.78□□□□□ -0.84
NIPBL-203ENST00000503274 ZC3H12CQ9C0D7 883 aaKnown RBP9.78□□□□□ -0.84
NIPBL-203ENST00000503274 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
NIPBL-203ENST00000503274 UNCXA6NJT0 531 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 GLB1P16278 677 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 PDE3AQ14432 1141 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 PCNX4Q63HM2 1172 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 KCNB2Q92953 911 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 CEP41Q9BYV8 373 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 BACH2Q9BYV9 841 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 CYP4F12Q9HCS2 524 aa9.77□□□□□ -0.85
NIPBL-203ENST00000503274 LRRC14Q15048 493 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 XP32Q5T750 250 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 ANKRD34AQ69YU3 496 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 FDX2Q6P4F2 183 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 MEGF10Q96KG7 1140 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 CCDC86Q9H6F5 360 aaKnown RBP9.76□□□□□ -0.85
NIPBL-203ENST00000503274 SUGCTQ9HAC7 445 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 RAD18Q9NS91 495 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 KRT82Q9NSB4 513 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 CYP8B1Q9UNU6 501 aa9.76□□□□□ -0.85
NIPBL-203ENST00000503274 RLBP1P12271 317 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms