RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 TDRD3Q9H7E2 651 aaKnown RBP17.38■□□□□ 0.37
DDR1-247ENST00000502955 C9orf78Q9NZ63 289 aaPredicted RBP17.38■□□□□ 0.37
DDR1-247ENST00000502955 GYG1P46976 350 aa17.37■□□□□ 0.37
DDR1-247ENST00000502955 TNNI2P48788 182 aa17.37■□□□□ 0.37
DDR1-247ENST00000502955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDR1-247ENST00000502955 CRKP46108 304 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 GTF2A2P52657 109 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 HDLBPQ00341 1268 aaKnown RBP17.36■□□□□ 0.37
DDR1-247ENST00000502955 VGLL4Q14135 290 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 CDAN1Q8IWY9 1227 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 BRI3BPQ8WY22 251 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 TMEM39BQ9GZU3 492 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
DDR1-247ENST00000502955 ARHGEF6Q15052 776 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 HABP4Q5JVS0 413 aaKnown RBP17.35■□□□□ 0.37
DDR1-247ENST00000502955 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 KAZALD1Q96I82 304 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 PUS3Q9BZE2 481 aaKnown RBP17.35■□□□□ 0.37
DDR1-247ENST00000502955 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 UTYO14607 1347 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
DDR1-247ENST00000502955 CCL15-CCL14A0A0B4J2E2 113 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 TCP10L2B9ZVM9 353 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 CCL15Q16663 113 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 MRIQ9BWK5 157 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
DDR1-247ENST00000502955 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
DDR1-247ENST00000502955 CSADQ9Y600 493 aa17.34■□□□□ 0.37
DDR1-247ENST00000502955 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.36
DDR1-247ENST00000502955 EN2P19622 333 aaPredicted RBP17.33■□□□□ 0.36
DDR1-247ENST00000502955 TAF1CQ15572 869 aaPredicted RBP17.33■□□□□ 0.36
DDR1-247ENST00000502955 RABL6Q3YEC7 729 aaPredicted RBP17.33■□□□□ 0.36
DDR1-247ENST00000502955 NBPF11Q86T75 865 aa17.33■□□□□ 0.36
DDR1-247ENST00000502955 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
DDR1-247ENST00000502955 GRIK5Q16478 980 aa17.32■□□□□ 0.36
DDR1-247ENST00000502955 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
DDR1-247ENST00000502955 FAM83AQ86UY5 434 aa17.32■□□□□ 0.36
DDR1-247ENST00000502955 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
DDR1-247ENST00000502955 TMEM106CQ9BVX2 250 aa17.32■□□□□ 0.36
DDR1-247ENST00000502955 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
DDR1-247ENST00000502955 TLR2O60603 784 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
DDR1-247ENST00000502955 SLC9C1Q4G0N8 1177 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 SLC4A10Q6U841 1118 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 ERO1BQ86YB8 467 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 TEKT1Q969V4 418 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 OTUD5Q96G74 571 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 ZDHHC15Q96MV8 337 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 SUGT1Q9Y2Z0 365 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
DDR1-247ENST00000502955 PTCH2Q9Y6C5 1203 aa17.31■□□□□ 0.36
DDR1-247ENST00000502955 RPAP1Q9BWH6 1393 aaPredicted RBP17.3■□□□□ 0.36
DDR1-247ENST00000502955 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
DDR1-247ENST00000502955 WDHD1O75717 1129 aaPredicted RBP17.3■□□□□ 0.36
DDR1-247ENST00000502955 GNRH1P01148 92 aa17.3■□□□□ 0.36
DDR1-247ENST00000502955 CETPP11597 493 aa17.3■□□□□ 0.36
DDR1-247ENST00000502955 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
DDR1-247ENST00000502955 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
DDR1-247ENST00000502955 SNCAIPQ9Y6H5 919 aa17.3■□□□□ 0.36
DDR1-247ENST00000502955 PDE8BO95263 885 aa17.29■□□□□ 0.36
DDR1-247ENST00000502955 MAST3O60307 1309 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 IRF6O14896 467 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 LACTBP83111 547 aaPredicted RBP17.28■□□□□ 0.36
DDR1-247ENST00000502955 SNAPC2Q13487 334 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 LRRC24Q50LG9 513 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 METTL24Q5JXM2 366 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 APOBEC3HQ6NTF7 200 aaKnown RBP17.28■□□□□ 0.36
DDR1-247ENST00000502955 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 WRNIP1Q96S55 665 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
DDR1-247ENST00000502955 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
DDR1-247ENST00000502955 BTBD19C9JJ37 291 aa17.27■□□□□ 0.36
DDR1-247ENST00000502955 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
DDR1-247ENST00000502955 CACNB3P54284 484 aa17.27■□□□□ 0.36
DDR1-247ENST00000502955 PRMT2P55345 433 aa17.27■□□□□ 0.36
DDR1-247ENST00000502955 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
DDR1-247ENST00000502955 PPIL2Q13356 520 aa17.27■□□□□ 0.36
DDR1-247ENST00000502955 HHIPL2Q6UWX4 724 aa17.27■□□□□ 0.36
DDR1-247ENST00000502955 PPATQ06203 517 aa17.26■□□□□ 0.35
DDR1-247ENST00000502955 KIF22Q14807 665 aa17.26■□□□□ 0.35
DDR1-247ENST00000502955 DCAF15Q66K64 600 aa17.26■□□□□ 0.35
DDR1-247ENST00000502955 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
DDR1-247ENST00000502955 ZSWIM8A7E2V4 1837 aa17.26■□□□□ 0.35
DDR1-247ENST00000502955 FGFR2P21802 821 aa17.25■□□□□ 0.35
DDR1-247ENST00000502955 BCAMP50895 628 aa17.25■□□□□ 0.35
DDR1-247ENST00000502955 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDR1-247ENST00000502955 PUM3Q15397 648 aaKnown RBP17.25■□□□□ 0.35
DDR1-247ENST00000502955 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
DDR1-247ENST00000502955 ARHGAP39Q9C0H5 1083 aa17.25■□□□□ 0.35
DDR1-247ENST00000502955 SZT2Q5T011 3432 aa17.24■□□□□ 0.35
DDR1-247ENST00000502955 C17orf99Q6UX52 265 aa17.24■□□□□ 0.35
DDR1-247ENST00000502955 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms