RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 CCDC102BQ68D86 513 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 ZBTB43O43298 467 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 LMOD1P29536 600 aaPredicted RBP17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 FBXO18Q8NFZ0 1043 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 KCNG4Q8TDN1 519 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 ARMT1Q9H993 441 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 MBD4O95243 580 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 SLC12A7Q9Y666 1083 aa17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 ZNF335Q9H4Z2 1342 aaPredicted RBP17.42■□□□□ 0.38
SH3TC1-206ENST00000502669 C5P01031 1676 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 NRDCO43847 1150 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 CBX1P83916 185 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 CCDC112Q8NEF3 446 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 SPECC1Q5M775 1068 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 ERICH2A1L162 156 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 TMC6Q7Z403 805 aa17.41■□□□□ 0.38
SH3TC1-206ENST00000502669 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 CDKL5O76039 1030 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 PDE6AP16499 860 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 ANO1Q5XXA6 986 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 MTERF4Q7Z6M4 381 aaKnown RBP17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 CAVIN2O95810 425 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 DPCR1Q3MIW9 517 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 TBC1D10CQ8IV04 446 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 ZNF202O95125 648 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 SLC5A1P13866 664 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 SYKP43405 635 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 ADALQ6DHV7 355 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 PDCL2Q8N4E4 241 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 LINC00301Q8NCQ3 95 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 IFNKQ9P0W0 207 aa17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 V9GYY5 206 aaPredicted RBP17.4■□□□□ 0.38
SH3TC1-206ENST00000502669 JCADQ9P266 1359 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 PDE8BO95263 885 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 ANTXR2P58335 489 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 PPP4R3BQ5MIZ7 849 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 MB21D2Q8IYB1 491 aaPredicted RBP17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 SENP2Q9HC62 589 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 SERPINC1P01008 464 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 ADD2P35612 726 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 KRT40Q6A162 431 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 PDILTQ8N807 584 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 SEC31BQ9NQW1 1179 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 RAI14Q9P0K7 980 aa17.39■□□□□ 0.37
SH3TC1-206ENST00000502669 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 CYB5R4Q7L1T6 521 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 HOMER1Q86YM7 354 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 USP54Q70EL1 1684 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 PDE8AO60658 829 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 PTPN14Q15678 1187 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 PTPN21Q16825 1174 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 RTEL1Q9NZ71 1219 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 RIPOR2Q9Y4F9 1068 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 AKAP17AQ02040 695 aaKnown RBP17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 ILDR1Q86SU0 546 aaPredicted RBP17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 PLA2G4DQ86XP0 818 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 JMYQ8N9B5 988 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 CLIC6Q96NY7 704 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 SLC4A4Q9Y6R1 1079 aa17.38■□□□□ 0.37
SH3TC1-206ENST00000502669 SART3Q15020 963 aaKnown RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 ATL3Q6DD88 541 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 BRAPQ7Z569 592 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 PFKFB1P16118 471 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 IGHMBP2P38935 993 aaKnown RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 IQCB1Q15051 598 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 KIAA1468Q9P260 1216 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 PRKAB2O43741 272 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 UQCRFS1P1P0C7P4 283 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 SSRP1Q08945 709 aaKnown RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 TRIM22Q8IYM9 498 aa17.37■□□□□ 0.37
SH3TC1-206ENST00000502669 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
SH3TC1-206ENST00000502669 CFAP100Q494V2 611 aa17.36■□□□□ 0.37
SH3TC1-206ENST00000502669 CEP135Q66GS9 1140 aa17.36■□□□□ 0.37
SH3TC1-206ENST00000502669 KCNJ14Q9UNX9 436 aa17.36■□□□□ 0.37
SH3TC1-206ENST00000502669 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms