RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ROBO2Q9HCK4 1378 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 CRB1P82279 1406 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 SSH2Q76I76 1423 aa4.79□□□□□ -1.64
CLTC-209ENST00000498711 POTEB3A0JP26 581 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 CHL1O00533 1208 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 ATF3P18847 181 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 DAB2P98082 770 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 POTEBQ6S5H4 581 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 STAG2Q8N3U4 1231 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 CCDC87Q9NVE4 849 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 ARHGEF10O15013 1369 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 USP31Q70CQ4 1352 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 ATRNO75882 1429 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 FAM208AQ9UK61 1670 aaKnown RBP4.78□□□□□ -1.64
CLTC-209ENST00000498711 TNS3Q68CZ2 1445 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 U2SURPO15042 1029 aaKnown RBP4.78□□□□□ -1.64
CLTC-209ENST00000498711 GPR182O15218 404 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 S1PR4O95977 384 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 HSP90AB1P08238 724 aaKnown RBP4.78□□□□□ -1.64
CLTC-209ENST00000498711 CUL4AQ13619 759 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 ANKRD45Q5TZF3 282 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 METTL16Q86W50 562 aaKnown RBP4.78□□□□□ -1.64
CLTC-209ENST00000498711 NT5DC4Q86YG4 428 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 ABTB2Q8N961 1025 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 CABP1Q9NZU7 370 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 SERTAD1Q9UHV2 236 aa4.78□□□□□ -1.64
CLTC-209ENST00000498711 THSD7AQ9UPZ6 1657 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 PTPRCP08575 1304 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 A0A1W2PRU2 124 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 TNFRSF10BO14763 440 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 PPP1R12BO60237 982 aaPredicted RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 STAU1O95793 577 aaKnown RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 IGHA2P01877 340 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 VARSP26640 1264 aaKnown RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 MCM5P33992 734 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 FANCCQ00597 558 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 PSMD2Q13200 908 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 COX20Q5RI15 118 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 ZNF772Q68DY9 489 aaPredicted RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 C8orf58Q8NAV2 365 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 SLC4A9Q96Q91 983 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 C2orf49Q9BVC5 232 aaPredicted RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 IL21Q9HBE4 155 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 VTI1BQ9UEU0 232 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 PEAK1Q9H792 1746 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 SLIT3O75094 1523 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 OVOS2A0A0J9YW53 1432 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 OVOS2Q6IE36 1432 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 NPHP3Q7Z494 1330 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 TWISTNBQ3B726 338 aaPredicted RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 ZSCAN30Q86W11 494 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 TGIF2Q9GZN2 237 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 ETNK1Q9HBU6 452 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 NOL7Q9UMY1 257 aaKnown RBP4.77□□□□□ -1.65
CLTC-209ENST00000498711 SLIT2O94813 1529 aa4.77□□□□□ -1.65
CLTC-209ENST00000498711 FOXK2Q01167 660 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 CEP85Q6P2H3 762 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 RNF34Q969K3 372 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 LMO7Q8WWI1 1683 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 DHX9Q08211 1270 aaKnown RBP4.76□□□□□ -1.65
CLTC-209ENST00000498711 TJAP1Q5JTD0 557 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 BRINP3Q76B58 766 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 SLC9A9Q8IVB4 645 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 LRRC59Q96AG4 307 aaKnown RBP4.76□□□□□ -1.65
CLTC-209ENST00000498711 TANGO6Q9C0B7 1094 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 CCSER2Q9H7U1 834 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 QTRT2Q9H974 415 aaKnown RBP4.76□□□□□ -1.65
CLTC-209ENST00000498711 CYLDQ9NQC7 956 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 SCHIP1Q9P0W5 487 aaPredicted RBP4.76□□□□□ -1.65
CLTC-209ENST00000498711 AOX1Q06278 1338 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 SOS1Q07889 1333 aaPredicted RBP4.76□□□□□ -1.65
CLTC-209ENST00000498711 ESCO1Q5FWF5 840 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 ALG1LQ6GMV1 187 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 CYP2U1Q7Z449 544 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 ZNF516Q92618 1163 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 INTS4Q96HW7 963 aaKnown RBP4.76□□□□□ -1.65
CLTC-209ENST00000498711 STAP2Q9UGK3 403 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 CHMP3Q9Y3E7 222 aa4.76□□□□□ -1.65
CLTC-209ENST00000498711 PLEKHG2Q9H7P9 1386 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 PARP4Q9UKK3 1724 aaKnown RBP4.75□□□□□ -1.65
CLTC-209ENST00000498711 PXDNLA1KZ92 1463 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 ZBTB24O43167 697 aaPredicted RBP4.75□□□□□ -1.65
CLTC-209ENST00000498711 GNRH1P01148 92 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 HSP90AA1P07900 732 aaKnown RBP4.75□□□□□ -1.65
CLTC-209ENST00000498711 ZNF76P36508 570 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 ANAPC15P60006 121 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 PSMA6P60900 246 aaKnown RBP4.75□□□□□ -1.65
CLTC-209ENST00000498711 ENOX2Q16206 610 aaKnown RBP4.75□□□□□ -1.65
CLTC-209ENST00000498711 SLC43A3Q8NBI5 491 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 MYO19Q96H55 970 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 SLC26A8Q96RN1 970 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 RBSNQ9H1K0 784 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 PDCL3Q9H2J4 239 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 WWC3Q9ULE0 1092 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 LRP5O75197 1615 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 A6NJY4 79 aa4.75□□□□□ -1.65
CLTC-209ENST00000498711 SDSP20132 328 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms