RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 UBR2Q8IWV8 1755 aa7.49□□□□□ -1.21
SPTA1-209ENST00000498708 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
SPTA1-209ENST00000498708 TCERG1O14776 1098 aaKnown RBP7.49□□□□□ -1.21
SPTA1-209ENST00000498708 A1BGP04217 495 aa7.49□□□□□ -1.21
SPTA1-209ENST00000498708 IL6STP40189 918 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-209ENST00000498708 EIF4G2P78344 907 aaKnown RBP eCLIP7.49□□□□□ -1.21
SPTA1-209ENST00000498708 AOC3Q16853 763 aa7.49□□□□□ -1.21
SPTA1-209ENST00000498708 PARP9Q8IXQ6 854 aa7.49□□□□□ -1.21
SPTA1-209ENST00000498708 CNOT7Q9UIV1 285 aaKnown RBP7.49□□□□□ -1.21
SPTA1-209ENST00000498708 RNMTO43148 476 aaKnown RBP7.48□□□□□ -1.21
SPTA1-209ENST00000498708 SIAH2O43255 324 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 PPIP5K2O43314 1243 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 RAD17O75943 681 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 EGFRP00533 1210 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 KCNH2Q12809 1159 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
SPTA1-209ENST00000498708 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-209ENST00000498708 KRT26Q7Z3Y9 468 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 BCL2L13Q9BXK5 485 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 UNC93B1Q9H1C4 597 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 WASF2Q9Y6W5 498 aa7.48□□□□□ -1.21
SPTA1-209ENST00000498708 SPTLC1O15269 473 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 FKTNO75072 461 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 HMOX1P09601 288 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 PIP4K2AP48426 406 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-209ENST00000498708 SH3BP2P78314 561 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 TBC1D10BQ4KMP7 808 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-209ENST00000498708 CC2D2BQ6DHV5 1058 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 TPTE2Q6XPS3 522 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 DZIP3Q86Y13 1208 aaKnown RBP7.47□□□□□ -1.21
SPTA1-209ENST00000498708 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 MRC1P22897 1456 aa7.47□□□□□ -1.21
SPTA1-209ENST00000498708 SOX1O00570 391 aaPredicted RBP7.46□□□□□ -1.22
SPTA1-209ENST00000498708 IL13P35225 146 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 CRY2Q49AN0 593 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.22
SPTA1-209ENST00000498708 OTOP1Q7RTM1 612 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
SPTA1-209ENST00000498708 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 TIMELESSQ9UNS1 1208 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 KNSTRNQ9Y448 316 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 TRIM17Q9Y577 477 aa7.46□□□□□ -1.22
SPTA1-209ENST00000498708 H7C1D1 291 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 WFS1O76024 890 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 VARSP26640 1264 aaKnown RBP7.45□□□□□ -1.22
SPTA1-209ENST00000498708 TM4SF4P48230 202 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 LYPD8Q6UX82 237 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 CLEC4GQ6UXB4 293 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 MOB2Q70IA6 237 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 BAP1Q92560 729 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 PRO3102Q9H379 93 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 NIP7Q9Y221 180 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPTA1-209ENST00000498708 ASTN2O75129 1339 aaPredicted RBP7.45□□□□□ -1.22
SPTA1-209ENST00000498708 CDHR2Q9BYE9 1310 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 ABCC12Q96J65 1359 aa7.45□□□□□ -1.22
SPTA1-209ENST00000498708 YDJCA8MPS7 323 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 HOXA10P31260 410 aaPredicted RBP7.44□□□□□ -1.22
SPTA1-209ENST00000498708 MTHFSDQ2M296 383 aaKnown RBP7.44□□□□□ -1.22
SPTA1-209ENST00000498708 CC2D1BQ5T0F9 858 aaKnown RBP7.44□□□□□ -1.22
SPTA1-209ENST00000498708 LCE2AQ5TA79 106 aaPredicted RBP7.44□□□□□ -1.22
SPTA1-209ENST00000498708 RIC3Q7Z5B4 369 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 MPNDQ8N594 471 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
SPTA1-209ENST00000498708 ARMC5Q96C12 935 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 DCPSQ96C86 337 aaKnown RBP7.44□□□□□ -1.22
SPTA1-209ENST00000498708 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 PCDHB15Q9Y5E8 787 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
SPTA1-209ENST00000498708 PRAMEF22A3QJZ6 481 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 UBE2Q2LH0YL09 131 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 SNRPBP14678 240 aaKnown RBP7.43□□□□□ -1.22
SPTA1-209ENST00000498708 CTHP32929 405 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 CAP1Q01518 475 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 TNIP1Q15025 636 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 HLFQ16534 295 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 LINC01559Q495D7 138 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 TTC5Q8N0Z6 440 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
SPTA1-209ENST00000498708 PTPN22Q9Y2R2 807 aa7.43□□□□□ -1.22
SPTA1-209ENST00000498708 EYSQ5T1H1 3165 aa7.42□□□□□ -1.22
SPTA1-209ENST00000498708 WTIPA6NIX2 430 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 CAPN5O15484 640 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 GTF2E1P29083 439 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 NPM2Q86SE8 214 aaKnown RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 RPGRQ92834 1020 aaKnown RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 CFHR5Q9BXR6 569 aa7.42□□□□□ -1.22
SPTA1-209ENST00000498708 RTFDC1Q9BY42 306 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-209ENST00000498708 VPS33BQ9H267 617 aa7.42□□□□□ -1.22
SPTA1-209ENST00000498708 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
SPTA1-209ENST00000498708 USP16Q9Y5T5 823 aa7.42□□□□□ -1.22
SPTA1-209ENST00000498708 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 PSMD14O00487 310 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 KCNQ3O43525 872 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 DIAPH1O60610 1272 aaKnown RBP7.41□□□□□ -1.22
SPTA1-209ENST00000498708 PDE4DQ08499 809 aa7.41□□□□□ -1.22
SPTA1-209ENST00000498708 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms