RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 WASHC4Q2M389 1173 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 POTEAQ6S8J7 498 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 SPEF2Q9C093 1822 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 SKILP12757 684 aa19.11■□□□□ 0.65
COL6A1-206ENST00000498614 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL6A1-206ENST00000498614 LLPHQ9BRT6 129 aaKnown RBP19.11■□□□□ 0.65
COL6A1-206ENST00000498614 RCOR1Q9UKL0 485 aa19.11■□□□□ 0.65
COL6A1-206ENST00000498614 PCCAP05165 728 aaPredicted RBP19.11■□□□□ 0.65
COL6A1-206ENST00000498614 SNW1Q13573 536 aaKnown RBP19.11■□□□□ 0.65
COL6A1-206ENST00000498614 NYAP1Q6ZVC0 841 aa19.11■□□□□ 0.65
COL6A1-206ENST00000498614 DHX40Q8IX18 779 aaKnown RBP19.11■□□□□ 0.65
COL6A1-206ENST00000498614 AGXT2Q9BYV1 514 aa19.11■□□□□ 0.65
COL6A1-206ENST00000498614 AKAP2Q9Y2D5 859 aa19.11■□□□□ 0.65
COL6A1-206ENST00000498614 GPTP24298 496 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 HAND2P61296 217 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 PI16Q6UXB8 463 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 FILIP1Q7Z7B0 1213 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 CCDC69A6NI79 296 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 CTAGE5O15320 804 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 NEMFO60524 1076 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 CCZ1BP86790 482 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 CCZ1P86791 482 aaPredicted RBP19.1■□□□□ 0.65
COL6A1-206ENST00000498614 IFIT5Q13325 482 aaKnown RBP19.1■□□□□ 0.65
COL6A1-206ENST00000498614 KIF18AQ8NI77 898 aa19.1■□□□□ 0.65
COL6A1-206ENST00000498614 ZNF215Q9UL58 517 aaPredicted RBP19.1■□□□□ 0.65
COL6A1-206ENST00000498614 BECN2A8MW95 431 aa19.09■□□□□ 0.65
COL6A1-206ENST00000498614 ZAP70P43403 619 aa19.09■□□□□ 0.65
COL6A1-206ENST00000498614 TRIM28Q13263 835 aaKnown RBP19.09■□□□□ 0.65
COL6A1-206ENST00000498614 PTPN14Q15678 1187 aa19.09■□□□□ 0.65
COL6A1-206ENST00000498614 TICAM2Q86XR7 235 aa19.09■□□□□ 0.65
COL6A1-206ENST00000498614 ZBTB38Q8NAP3 1195 aaPredicted RBP19.09■□□□□ 0.65
COL6A1-206ENST00000498614 USP28Q96RU2 1077 aa19.09■□□□□ 0.65
COL6A1-206ENST00000498614 TRMT1Q9NXH9 659 aaKnown RBP19.09■□□□□ 0.65
COL6A1-206ENST00000498614 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.09■□□□□ 0.65
COL6A1-206ENST00000498614 V9GYY5 206 aaPredicted RBP19.09■□□□□ 0.65
COL6A1-206ENST00000498614 PDIA3P30101 505 aaKnown RBP19.08■□□□□ 0.65
COL6A1-206ENST00000498614 HLFQ16534 295 aa19.08■□□□□ 0.65
COL6A1-206ENST00000498614 ERCC4Q92889 916 aaPredicted RBP19.08■□□□□ 0.65
COL6A1-206ENST00000498614 GPHNQ9NQX3 736 aaPredicted RBP19.08■□□□□ 0.65
COL6A1-206ENST00000498614 FOXP2O15409 715 aa19.08■□□□□ 0.64
COL6A1-206ENST00000498614 RXRBP28702 533 aa19.08■□□□□ 0.64
COL6A1-206ENST00000498614 GUCY1B3Q02153 619 aa19.08■□□□□ 0.64
COL6A1-206ENST00000498614 NAA16Q6N069 864 aaPredicted RBP19.08■□□□□ 0.64
COL6A1-206ENST00000498614 KRT27Q7Z3Y8 459 aa19.08■□□□□ 0.64
COL6A1-206ENST00000498614 MORC2Q9Y6X9 1032 aaPredicted RBP19.08■□□□□ 0.64
COL6A1-206ENST00000498614 CSF1RP07333 972 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 CCDC73Q6ZRK6 1079 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 ENGASEQ8NFI3 743 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 MYH15Q9Y2K3 1946 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 KINO60870 393 aaKnown RBP19.07■□□□□ 0.64
COL6A1-206ENST00000498614 STARD3NLO95772 234 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 KMT5BQ4FZB7 885 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 FBXW7Q969H0 707 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 PLA2G12BQ9BX93 195 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 TEX13AQ9BXU3 409 aaPredicted RBP19.07■□□□□ 0.64
COL6A1-206ENST00000498614 PUS7LQ9H0K6 701 aaKnown RBP19.07■□□□□ 0.64
COL6A1-206ENST00000498614 FBXO3Q9UK99 471 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 MAP3K15Q6ZN16 1313 aa19.07■□□□□ 0.64
COL6A1-206ENST00000498614 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
COL6A1-206ENST00000498614 METTL24Q5JXM2 366 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 GIGYF2Q6Y7W6 1299 aaKnown RBP19.06■□□□□ 0.64
COL6A1-206ENST00000498614 ZNF771Q7L3S4 317 aaPredicted RBP19.06■□□□□ 0.64
COL6A1-206ENST00000498614 ANO10Q9NW15 660 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 SALL1Q9NSC2 1324 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 RIC1Q4ADV7 1423 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 CCAR2Q8N163 923 aaKnown RBP19.06■□□□□ 0.64
COL6A1-206ENST00000498614 AOPEPQ8N6M6 819 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 FSIP1Q8NA03 581 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 ZNF274Q96GC6 653 aaPredicted RBP19.06■□□□□ 0.64
COL6A1-206ENST00000498614 GREM2Q9H772 168 aa19.06■□□□□ 0.64
COL6A1-206ENST00000498614 FGAP02671 866 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 ITGA6P23229 1130 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 FAM160A1Q05DH4 1040 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 GABPB1Q06547 395 aaPredicted RBP19.05■□□□□ 0.64
COL6A1-206ENST00000498614 IMMTQ16891 758 aaKnown RBP19.05■□□□□ 0.64
COL6A1-206ENST00000498614 ZNF397Q8NF99 534 aaPredicted RBP19.05■□□□□ 0.64
COL6A1-206ENST00000498614 BRWD3Q6RI45 1802 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 ZFYP08048 801 aaPredicted RBP19.05■□□□□ 0.64
COL6A1-206ENST00000498614 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 ILDR1Q86SU0 546 aaPredicted RBP19.05■□□□□ 0.64
COL6A1-206ENST00000498614 NLRP10Q86W26 655 aa19.05■□□□□ 0.64
COL6A1-206ENST00000498614 ME1P48163 572 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 TTLL11Q8NHH1 800 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 APPBP2Q92624 585 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 LOC102724428A0A0B4J2F2 783 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 SIK1P57059 783 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 CEP57L1Q8IYX8 460 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 RIPOR2Q9Y4F9 1068 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 CARMIL3Q8ND23 1372 aa19.04■□□□□ 0.64
COL6A1-206ENST00000498614 TRIM37O94972 964 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 SLFN14P0C7P3 912 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 MCAMP43121 646 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 ELF2Q15723 593 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 NBPF11Q86T75 865 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 RAB11FIP4Q86YS3 637 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 ZNF396Q96N95 335 aaPredicted RBP19.03■□□□□ 0.64
COL6A1-206ENST00000498614 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
COL6A1-206ENST00000498614 GPAA1O43292 621 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms