RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 COL4A3BPQ9Y5P4 624 aa8.61□□□□□ -1.03
PMPCB-208ENST00000498530 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 METTL12A8MUP2 240 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 PDE2AO00408 941 aaPredicted RBP8.6□□□□□ -1.03
PMPCB-208ENST00000498530 CILPO75339 1184 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 ZNF165P49910 485 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 ANAPC15P60006 121 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 ARSHQ5FYA8 562 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 SCARA3Q6AZY7 606 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 FILIP1Q7Z7B0 1213 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 HHIPQ96QV1 700 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 ACTR10Q9NZ32 417 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 MARK1Q9P0L2 795 aa8.6□□□□□ -1.03
PMPCB-208ENST00000498530 DNAJC6O75061 913 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 BNC2Q6ZN30 1099 aaPredicted RBP8.59□□□□□ -1.03
PMPCB-208ENST00000498530 KIAA0907Q7Z7F0 614 aaPredicted RBP8.59□□□□□ -1.03
PMPCB-208ENST00000498530 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 SPC25Q9HBM1 224 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 CWC22Q9HCG8 908 aaKnown RBP8.59□□□□□ -1.03
PMPCB-208ENST00000498530 PCDH12Q9NPG4 1184 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 IFT57Q9NWB7 429 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 TMEM260Q9NX78 707 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
PMPCB-208ENST00000498530 HCN2Q9UL51 889 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 CYP8B1Q9UNU6 501 aa8.59□□□□□ -1.03
PMPCB-208ENST00000498530 PDPK1O15530 556 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 PPP2R3AQ06190 1150 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 FAM182BQ5T319 152 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
PMPCB-208ENST00000498530 REC114Q7Z4M0 266 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 FBXO27Q8NI29 283 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 APPBP2Q92624 585 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
PMPCB-208ENST00000498530 FERD3LQ96RJ6 166 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 CHMP4AQ9BY43 222 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
PMPCB-208ENST00000498530 SLKQ9H2G2 1235 aaPredicted RBP8.58□□□□□ -1.04
PMPCB-208ENST00000498530 FANCLQ9NW38 375 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 MAPK8IP1Q9UQF2 711 aa8.58□□□□□ -1.04
PMPCB-208ENST00000498530 BNIP3LO60238 219 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 TRPA1O75762 1119 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 B3GALT4O96024 378 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 LMNB1P20700 586 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 NME2P22392 152 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 CASP7P55210 303 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 IFRD2Q12894 506 aaPredicted RBP8.57□□□□□ -1.04
PMPCB-208ENST00000498530 LILRB2Q8N423 598 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 JMYQ8N9B5 988 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 C19orf47Q8N9M1 422 aaKnown RBP8.57□□□□□ -1.04
PMPCB-208ENST00000498530 BHMTQ93088 406 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 DNAJC7Q99615 494 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 SLC30A3Q99726 388 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 CLEC4MQ9H2X3 399 aaPredicted RBP8.57□□□□□ -1.04
PMPCB-208ENST00000498530 PCDHB5Q9Y5E4 795 aa8.57□□□□□ -1.04
PMPCB-208ENST00000498530 H7C1W4 665 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 TLR3O15455 904 aaKnown RBP8.56□□□□□ -1.04
PMPCB-208ENST00000498530 MARCH6O60337 910 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 BMP6P22004 513 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 LRRC14Q15048 493 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 RASIP1Q5U651 963 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 LSRQ86X29 649 aaPredicted RBP8.56□□□□□ -1.04
PMPCB-208ENST00000498530 TMEM151AQ8N4L1 468 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 GAL3ST3Q96A11 431 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 PLD4Q96BZ4 506 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 EHMT1Q9H9B1 1298 aa8.56□□□□□ -1.04
PMPCB-208ENST00000498530 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 PPP1R12AO14974 1030 aaPredicted RBP8.55□□□□□ -1.04
PMPCB-208ENST00000498530 ATE1O95260 518 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 SIK1P57059 783 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 RASSF7Q02833 373 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 NEUROD1Q13562 356 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 PCSK7Q16549 785 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 FXNQ16595 210 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 ASAP3Q8TDY4 903 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 BSNDQ8WZ55 320 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 GMCL1Q96IK5 515 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 MUC3BQ9H195 1237 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
PMPCB-208ENST00000498530 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
PMPCB-208ENST00000498530 CCDC85CA6NKD9 419 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 GDF11O95390 407 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 C2orf27AQ580R0 203 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 TAF7LQ5H9L4 462 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 TRIM22Q8IYM9 498 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 ZNF669Q96BR6 464 aaPredicted RBP8.54□□□□□ -1.04
PMPCB-208ENST00000498530 FEZ1Q99689 392 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 BRMS1Q9HCU9 246 aa8.54□□□□□ -1.04
PMPCB-208ENST00000498530 ESYT3A0FGR9 886 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 BPNT1O95861 308 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 MCM4P33991 863 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 ATP11AP98196 1134 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms