RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 OSBPL7Q9BZF2 842 aa8.28□□□□□ -1.08
SSR3-209ENST00000498205 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
SSR3-209ENST00000498205 SAMM50Q9Y512 469 aa8.28□□□□□ -1.08
SSR3-209ENST00000498205 ADAM11O75078 769 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 NOS3P29474 1203 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 IREB2P48200 963 aaKnown RBP8.27□□□□□ -1.09
SSR3-209ENST00000498205 DAB2P98082 770 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 C3orf58Q8NDZ4 430 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 CORO1BQ9BR76 489 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 RUSC1Q9BVN2 902 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 CYP4F12Q9HCS2 524 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 GPN3Q9UHW5 284 aaPredicted RBP8.27□□□□□ -1.09
SSR3-209ENST00000498205 AKAP2Q9Y2D5 859 aa8.27□□□□□ -1.09
SSR3-209ENST00000498205 PSMD2Q13200 908 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 POU4F3Q15319 338 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
SSR3-209ENST00000498205 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
SSR3-209ENST00000498205 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 EMILIN2Q9BXX0 1053 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 KCNK4Q9NYG8 393 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 PARP2Q9UGN5 583 aa8.26□□□□□ -1.09
SSR3-209ENST00000498205 LOC100289279A0A1B0GTE1 492 aa8.25□□□□□ -1.09
SSR3-209ENST00000498205 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
SSR3-209ENST00000498205 NRSN2Q9GZP1 204 aa8.25□□□□□ -1.09
SSR3-209ENST00000498205 SUGCTQ9HAC7 445 aa8.25□□□□□ -1.09
SSR3-209ENST00000498205 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
SSR3-209ENST00000498205 SYNGAP1Q96PV0 1343 aa8.25□□□□□ -1.09
SSR3-209ENST00000498205 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
SSR3-209ENST00000498205 SORBS3O60504 671 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 USP17L7P0C7H9 530 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 GLB1P16278 677 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 SCARA3Q6AZY7 606 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 FDX2Q6P4F2 183 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 UBASH3BQ8TF42 649 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
SSR3-209ENST00000498205 TMPRSS13Q9BYE2 586 aa8.24□□□□□ -1.09
SSR3-209ENST00000498205 SART1O43290 800 aaKnown RBP8.23□□□□□ -1.09
SSR3-209ENST00000498205 WISP1O95388 367 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 H2AFB2P0C5Z0 115 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 FAAP100Q0VG06 881 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 SV2BQ7L1I2 683 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 SMG8Q8ND04 991 aaKnown RBP8.23□□□□□ -1.09
SSR3-209ENST00000498205 KRT82Q9NSB4 513 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 HIF3AQ9Y2N7 669 aa8.23□□□□□ -1.09
SSR3-209ENST00000498205 NME2P22392 152 aa8.22□□□□□ -1.09
SSR3-209ENST00000498205 MAOBP27338 520 aa8.22□□□□□ -1.09
SSR3-209ENST00000498205 TP53INP1Q96A56 240 aa8.22□□□□□ -1.09
SSR3-209ENST00000498205 NECAB3Q96P71 396 aaPredicted RBP8.22□□□□□ -1.09
SSR3-209ENST00000498205 TRIM56Q9BRZ2 755 aaKnown RBP8.22□□□□□ -1.09
SSR3-209ENST00000498205 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
SSR3-209ENST00000498205 ALX3O95076 343 aa8.21□□□□□ -1.1
SSR3-209ENST00000498205 RLBP1P12271 317 aa8.21□□□□□ -1.1
SSR3-209ENST00000498205 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
SSR3-209ENST00000498205 CRELD1Q96HD1 420 aa8.21□□□□□ -1.1
SSR3-209ENST00000498205 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
SSR3-209ENST00000498205 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
SSR3-209ENST00000498205 GSTP1P09211 210 aaKnown RBP8.2□□□□□ -1.1
SSR3-209ENST00000498205 ST13P50502 369 aaKnown RBP8.2□□□□□ -1.1
SSR3-209ENST00000498205 LRRC14Q15048 493 aa8.2□□□□□ -1.1
SSR3-209ENST00000498205 SLC51AQ86UW1 340 aa8.2□□□□□ -1.1
SSR3-209ENST00000498205 GIPC2Q8TF65 315 aa8.2□□□□□ -1.1
SSR3-209ENST00000498205 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
SSR3-209ENST00000498205 DHX15O43143 795 aaKnown RBP8.19□□□□□ -1.1
SSR3-209ENST00000498205 ARNTP27540 789 aa8.19□□□□□ -1.1
SSR3-209ENST00000498205 DOC2BQ14184 412 aa8.19□□□□□ -1.1
SSR3-209ENST00000498205 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
SSR3-209ENST00000498205 TPTE2Q6XPS3 522 aa8.19□□□□□ -1.1
SSR3-209ENST00000498205 SULF2Q8IWU5 870 aa8.19□□□□□ -1.1
SSR3-209ENST00000498205 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
SSR3-209ENST00000498205 RAD18Q9NS91 495 aa8.19□□□□□ -1.1
SSR3-209ENST00000498205 ENC1O14682 589 aa8.18□□□□□ -1.1
SSR3-209ENST00000498205 GAS2O43903 313 aaKnown RBP8.18□□□□□ -1.1
SSR3-209ENST00000498205 SLFN14P0C7P3 912 aa8.18□□□□□ -1.1
SSR3-209ENST00000498205 ZNF157P51786 506 aaPredicted RBP8.18□□□□□ -1.1
SSR3-209ENST00000498205 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
SSR3-209ENST00000498205 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.18□□□□□ -1.1
SSR3-209ENST00000498205 C12orf50Q8NA57 414 aaPredicted RBP8.18□□□□□ -1.1
SSR3-209ENST00000498205 MYRFLQ96LU7 910 aa8.18□□□□□ -1.1
SSR3-209ENST00000498205 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
SSR3-209ENST00000498205 YIPF2Q9BWQ6 316 aa8.18□□□□□ -1.1
SSR3-209ENST00000498205 VTI1BQ9UEU0 232 aa8.18□□□□□ -1.1
SSR3-209ENST00000498205 CYP8B1Q9UNU6 501 aa8.18□□□□□ -1.1
SSR3-209ENST00000498205 TIAF1O95411 115 aa8.17□□□□□ -1.1
SSR3-209ENST00000498205 DIEXFQ68CQ4 756 aaKnown RBP8.17□□□□□ -1.1
SSR3-209ENST00000498205 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
SSR3-209ENST00000498205 UBL7Q96S82 380 aaPredicted RBP8.17□□□□□ -1.1
SSR3-209ENST00000498205 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
SSR3-209ENST00000498205 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
SSR3-209ENST00000498205 GSC2O15499 205 aa8.16□□□□□ -1.1
SSR3-209ENST00000498205 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
SSR3-209ENST00000498205 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
SSR3-209ENST00000498205 CCDC85BQ15834 202 aaPredicted RBP8.16□□□□□ -1.1
SSR3-209ENST00000498205 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
SSR3-209ENST00000498205 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms