RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-218ENST00000498136 TEKT1Q969V4 418 aa20.58■□□□□ 0.89
ABCF3-218ENST00000498136 EXOC6BQ9Y2D4 811 aa20.58■□□□□ 0.89
ABCF3-218ENST00000498136 NOP58Q9Y2X3 529 aaKnown RBP20.58■□□□□ 0.89
ABCF3-218ENST00000498136 SUGT1Q9Y2Z0 365 aa20.58■□□□□ 0.89
ABCF3-218ENST00000498136 WDR33Q9C0J8 1336 aaKnown RBP20.57■□□□□ 0.88
ABCF3-218ENST00000498136 NF2P35240 595 aa20.57■□□□□ 0.88
ABCF3-218ENST00000498136 ECE1P42892 770 aa20.57■□□□□ 0.88
ABCF3-218ENST00000498136 TNNI3KQ59H18 835 aa20.57■□□□□ 0.88
ABCF3-218ENST00000498136 GPR108Q9NPR9 543 aa20.57■□□□□ 0.88
ABCF3-218ENST00000498136 FPGT-TNNI3KV9GXZ4 949 aa20.57■□□□□ 0.88
ABCF3-218ENST00000498136 LDHBP07195 334 aaKnown RBP20.56■□□□□ 0.88
ABCF3-218ENST00000498136 HDLBPQ00341 1268 aaKnown RBP20.56■□□□□ 0.88
ABCF3-218ENST00000498136 RASGRF1Q13972 1273 aa20.56■□□□□ 0.88
ABCF3-218ENST00000498136 TTLL12Q14166 644 aaPredicted RBP20.56■□□□□ 0.88
ABCF3-218ENST00000498136 CAPNS2Q96L46 248 aa20.56■□□□□ 0.88
ABCF3-218ENST00000498136 TDRD3Q9H7E2 651 aaKnown RBP20.56■□□□□ 0.88
ABCF3-218ENST00000498136 PRDX5P30044 214 aa20.55■□□□□ 0.88
ABCF3-218ENST00000498136 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
ABCF3-218ENST00000498136 HSP90AB4PQ58FF6 505 aa20.55■□□□□ 0.88
ABCF3-218ENST00000498136 ERC1Q8IUD2 1116 aa20.55■□□□□ 0.88
ABCF3-218ENST00000498136 ZGPATQ8N5A5 531 aaKnown RBP20.55■□□□□ 0.88
ABCF3-218ENST00000498136 DEFB129Q9H1M3 183 aa20.55■□□□□ 0.88
ABCF3-218ENST00000498136 ZNF70Q9UC06 446 aaPredicted RBP20.55■□□□□ 0.88
ABCF3-218ENST00000498136 ABCF2Q9UG63 623 aa20.55■□□□□ 0.88
ABCF3-218ENST00000498136 AOX1Q06278 1338 aa20.54■□□□□ 0.88
ABCF3-218ENST00000498136 APBB1O00213 710 aa20.54■□□□□ 0.88
ABCF3-218ENST00000498136 CCDC158Q5M9N0 1113 aa20.54■□□□□ 0.88
ABCF3-218ENST00000498136 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
ABCF3-218ENST00000498136 HHIPL1Q96JK4 782 aa20.54■□□□□ 0.88
ABCF3-218ENST00000498136 PAPPA2Q9BXP8 1791 aa20.54■□□□□ 0.88
ABCF3-218ENST00000498136 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 TNFAIP1Q13829 316 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 PRKG1Q13976 671 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 SPDYE2Q495Y8 402 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 DBNDD2Q9BQY9 259 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 PPP2R3BQ9Y5P8 575 aa20.53■□□□□ 0.88
ABCF3-218ENST00000498136 TCP10L2B9ZVM9 353 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 UQCRFS1P1P0C7P4 283 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 FKBP1BP68106 108 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 HHIPL2Q6UWX4 724 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 ZDHHC15Q96MV8 337 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 MRIQ9BWK5 157 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 CCDC8Q9H0W5 538 aaPredicted RBP20.52■□□□□ 0.88
ABCF3-218ENST00000498136 TMOD2Q9NZR1 351 aa20.52■□□□□ 0.88
ABCF3-218ENST00000498136 PDS5AQ29RF7 1337 aaKnown RBP20.52■□□□□ 0.87
ABCF3-218ENST00000498136 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 HSPA1AP0DMV8 641 aaKnown RBP20.51■□□□□ 0.87
ABCF3-218ENST00000498136 HSPA1BP0DMV9 641 aaKnown RBP20.51■□□□□ 0.87
ABCF3-218ENST00000498136 ARID4AP29374 1257 aaPredicted RBP20.51■□□□□ 0.87
ABCF3-218ENST00000498136 TNNI2P48788 182 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 ZNF157P51786 506 aaPredicted RBP20.51■□□□□ 0.87
ABCF3-218ENST00000498136 RASA3Q14644 834 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 DIXDC1Q155Q3 683 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 SPTY2D1Q68D10 685 aaPredicted RBP20.51■□□□□ 0.87
ABCF3-218ENST00000498136 RGMBQ6NW40 437 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 PI16Q6UXB8 463 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 DZIP1Q86YF9 867 aaKnown RBP20.51■□□□□ 0.87
ABCF3-218ENST00000498136 SIRT2Q8IXJ6 389 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 SPATA5Q8NB90 893 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 HMG20BQ9P0W2 317 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 PCNTO95613 3336 aa20.51■□□□□ 0.87
ABCF3-218ENST00000498136 ZBTB22O15209 634 aa20.5■□□□□ 0.87
ABCF3-218ENST00000498136 AOC2O75106 756 aa20.5■□□□□ 0.87
ABCF3-218ENST00000498136 MCAMP43121 646 aa20.5■□□□□ 0.87
ABCF3-218ENST00000498136 MOB2Q70IA6 237 aa20.5■□□□□ 0.87
ABCF3-218ENST00000498136 RHPN1Q8TCX5 695 aa20.5■□□□□ 0.87
ABCF3-218ENST00000498136 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
ABCF3-218ENST00000498136 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 CACNB3P54284 484 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
ABCF3-218ENST00000498136 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 ARMC9Q7Z3E5 817 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 AACSQ86V21 672 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 EAF2Q96CJ1 260 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-218ENST00000498136 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
ABCF3-218ENST00000498136 DBNLQ9UJU6 430 aaKnown RBP20.49■□□□□ 0.87
ABCF3-218ENST00000498136 DAGLAQ9Y4D2 1042 aa20.49■□□□□ 0.87
ABCF3-218ENST00000498136 SUPT20HL1Q3ZLR7 823 aa20.48■□□□□ 0.87
ABCF3-218ENST00000498136 SLF2Q8IX21 1173 aa20.48■□□□□ 0.87
ABCF3-218ENST00000498136 AIDAQ96BJ3 306 aa20.48■□□□□ 0.87
ABCF3-218ENST00000498136 KIF1BPQ96EK5 621 aa20.48■□□□□ 0.87
ABCF3-218ENST00000498136 THSD7BQ9C0I4 1608 aa20.47■□□□□ 0.87
ABCF3-218ENST00000498136 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
ABCF3-218ENST00000498136 RAB11FIP3O75154 756 aa20.47■□□□□ 0.87
ABCF3-218ENST00000498136 MAP2K1Q02750 393 aaPredicted RBP20.47■□□□□ 0.87
ABCF3-218ENST00000498136 NBPF12Q5TAG4 269 aaPredicted RBP20.47■□□□□ 0.87
ABCF3-218ENST00000498136 TBC1D9Q6ZT07 1266 aa20.47■□□□□ 0.87
ABCF3-218ENST00000498136 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
ABCF3-218ENST00000498136 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
ABCF3-218ENST00000498136 RAI14Q9P0K7 980 aa20.47■□□□□ 0.87
ABCF3-218ENST00000498136 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.47■□□□□ 0.87
ABCF3-218ENST00000498136 ANGEL1Q9UNK9 670 aaKnown RBP20.47■□□□□ 0.87
ABCF3-218ENST00000498136 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
ABCF3-218ENST00000498136 NOGQ13253 232 aa20.46■□□□□ 0.87
ABCF3-218ENST00000498136 TMEM39BQ9GZU3 492 aa20.46■□□□□ 0.87
ABCF3-218ENST00000498136 LRP2BPQ9P2M1 347 aa20.46■□□□□ 0.87
ABCF3-218ENST00000498136 AKAP11Q9UKA4 1901 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms