RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 WNK4Q96J92 1243 aa28.25■■■□□ 2.11
CDKN2A-208ENST00000498124 TEPSINQ96N21 525 aa28.25■■■□□ 2.11
CDKN2A-208ENST00000498124 R3HDMLQ9H3Y0 253 aa28.25■■■□□ 2.11
CDKN2A-208ENST00000498124 EYA2O00167 538 aa28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 USP2O75604 605 aaPredicted RBP28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 PUM3Q15397 648 aaKnown RBP28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 CAVIN4Q5BKX8 364 aa28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 NOM1Q5C9Z4 860 aaKnown RBP28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 ATG9AQ7Z3C6 839 aa28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 NOB1Q9ULX3 412 aaKnown RBP28.24■■■□□ 2.11
CDKN2A-208ENST00000498124 UNCXA6NJT0 531 aa28.23■■■□□ 2.11
CDKN2A-208ENST00000498124 SLC10A4Q96EP9 437 aa28.23■■■□□ 2.11
CDKN2A-208ENST00000498124 HTTP42858 3142 aa28.23■■■□□ 2.11
CDKN2A-208ENST00000498124 GPR25O00155 361 aa28.22■■■□□ 2.11
CDKN2A-208ENST00000498124 ZBTB48P10074 688 aaPredicted RBP28.22■■■□□ 2.11
CDKN2A-208ENST00000498124 GJA5P36382 358 aa28.22■■■□□ 2.11
CDKN2A-208ENST00000498124 TNFAIP1Q13829 316 aa28.22■■■□□ 2.11
CDKN2A-208ENST00000498124 TBC1D22AQ8WUA7 517 aa28.22■■■□□ 2.11
CDKN2A-208ENST00000498124 HDLBPQ00341 1268 aaKnown RBP28.21■■■□□ 2.11
CDKN2A-208ENST00000498124 MYH13Q9UKX3 1938 aa28.21■■■□□ 2.11
CDKN2A-208ENST00000498124 MANSC4A6NHS7 340 aaPredicted RBP28.2■■■□□ 2.1
CDKN2A-208ENST00000498124 IREB2P48200 963 aaKnown RBP28.2■■■□□ 2.1
CDKN2A-208ENST00000498124 MLLT1Q03111 559 aaPredicted RBP28.2■■■□□ 2.1
CDKN2A-208ENST00000498124 TCP10L2B9ZVM9 353 aa28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 IGF2BP3O00425 579 aaKnown RBP eCLIP28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 FRAT2O75474 233 aaPredicted RBP28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 IFIT1P09914 478 aaKnown RBP28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 UBTFL1P0CB47 393 aaPredicted RBP28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 IFNL1Q8IU54 200 aa28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 TMEM39BQ9GZU3 492 aa28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.19■■■□□ 2.1
CDKN2A-208ENST00000498124 ANKRD13AQ8IZ07 590 aa28.18■■■□□ 2.1
CDKN2A-208ENST00000498124 LPIN2Q92539 896 aa28.18■■■□□ 2.1
CDKN2A-208ENST00000498124 API5Q9BZZ5 524 aaKnown RBP28.18■■■□□ 2.1
CDKN2A-208ENST00000498124 RARSP54136 660 aaKnown RBP28.17■■■□□ 2.1
CDKN2A-208ENST00000498124 CACNB3P54284 484 aa28.17■■■□□ 2.1
CDKN2A-208ENST00000498124 TEKT1Q969V4 418 aa28.17■■■□□ 2.1
CDKN2A-208ENST00000498124 ZDHHC15Q96MV8 337 aa28.17■■■□□ 2.1
CDKN2A-208ENST00000498124 LRRFIP2Q9Y608 721 aaKnown RBP28.17■■■□□ 2.1
CDKN2A-208ENST00000498124 CIAO1O76071 339 aa28.16■■■□□ 2.1
CDKN2A-208ENST00000498124 SLC5A1P13866 664 aa28.16■■■□□ 2.1
CDKN2A-208ENST00000498124 APOBEC3HQ6NTF7 200 aaKnown RBP28.16■■■□□ 2.1
CDKN2A-208ENST00000498124 SIL1Q9H173 461 aa28.16■■■□□ 2.1
CDKN2A-208ENST00000498124 HPS5Q9UPZ3 1129 aa28.16■■■□□ 2.1
CDKN2A-208ENST00000498124 SUGT1Q9Y2Z0 365 aa28.16■■■□□ 2.1
CDKN2A-208ENST00000498124 ALDH1A1P00352 501 aa28.15■■■□□ 2.1
CDKN2A-208ENST00000498124 INHBEP58166 350 aa28.15■■■□□ 2.1
CDKN2A-208ENST00000498124 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.15■■■□□ 2.1
CDKN2A-208ENST00000498124 MEIS3Q99687 375 aa28.15■■■□□ 2.1
CDKN2A-208ENST00000498124 MRIQ9BWK5 157 aa28.15■■■□□ 2.1
CDKN2A-208ENST00000498124 FBXO3Q9UK99 471 aa28.15■■■□□ 2.1
CDKN2A-208ENST00000498124 SOX10P56693 466 aa28.14■■■□□ 2.1
CDKN2A-208ENST00000498124 YTHDC1Q96MU7 727 aaKnown RBP28.14■■■□□ 2.1
CDKN2A-208ENST00000498124 ELP3Q9H9T3 547 aa28.14■■■□□ 2.1
CDKN2A-208ENST00000498124 FKTNO75072 461 aa28.13■■■□□ 2.09
CDKN2A-208ENST00000498124 TNNI2P48788 182 aa28.13■■■□□ 2.09
CDKN2A-208ENST00000498124 PKN2Q16513 984 aaKnown RBP28.13■■■□□ 2.09
CDKN2A-208ENST00000498124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.13■■■□□ 2.09
CDKN2A-208ENST00000498124 PA2G4Q9UQ80 394 aaKnown RBP28.13■■■□□ 2.09
CDKN2A-208ENST00000498124 MAST3O60307 1309 aa28.13■■■□□ 2.09
CDKN2A-208ENST00000498124 TESPA1A2RU30 521 aaPredicted RBP28.12■■■□□ 2.09
CDKN2A-208ENST00000498124 ATP2B3Q16720 1220 aa28.12■■■□□ 2.09
CDKN2A-208ENST00000498124 CNKSR2Q8WXI2 1034 aa28.12■■■□□ 2.09
CDKN2A-208ENST00000498124 PTPN18Q99952 460 aa28.12■■■□□ 2.09
CDKN2A-208ENST00000498124 VGLL4Q14135 290 aa28.11■■■□□ 2.09
CDKN2A-208ENST00000498124 HHIPL2Q6UWX4 724 aa28.11■■■□□ 2.09
CDKN2A-208ENST00000498124 OPTNQ96CV9 577 aa28.11■■■□□ 2.09
CDKN2A-208ENST00000498124 FKBP1CQ5VVH2 108 aa28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 INTS3Q68E01 1043 aaKnown RBP28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 FAM83AQ86UY5 434 aa28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 WDR66Q8TBY9 1149 aa28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 ARHGAP45Q92619 1136 aa28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 MS4A4AQ96JQ5 239 aa28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 COPRSQ9NQ92 184 aa28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 RPAP1Q9BWH6 1393 aaPredicted RBP28.1■■■□□ 2.09
CDKN2A-208ENST00000498124 CEP126Q9P2H0 1117 aa28.09■■■□□ 2.09
CDKN2A-208ENST00000498124 IL15P40933 162 aaPredicted RBP28.08■■■□□ 2.09
CDKN2A-208ENST00000498124 FBXO46Q6PJ61 603 aaPredicted RBP28.08■■■□□ 2.09
CDKN2A-208ENST00000498124 PRDX5P30044 214 aa28.07■■■□□ 2.08
CDKN2A-208ENST00000498124 PHKA1P46020 1223 aa28.07■■■□□ 2.08
CDKN2A-208ENST00000498124 MAP3K9P80192 1104 aa28.07■■■□□ 2.08
CDKN2A-208ENST00000498124 CRHR2Q13324 411 aa28.07■■■□□ 2.08
CDKN2A-208ENST00000498124 TNNQ9UQP3 1299 aa28.07■■■□□ 2.08
CDKN2A-208ENST00000498124 DAGLAQ9Y4D2 1042 aa28.07■■■□□ 2.08
CDKN2A-208ENST00000498124 CENPFP49454 3210 aa28.06■■■□□ 2.08
CDKN2A-208ENST00000498124 ADORA1P30542 326 aa28.06■■■□□ 2.08
CDKN2A-208ENST00000498124 DIXDC1Q155Q3 683 aa28.06■■■□□ 2.08
CDKN2A-208ENST00000498124 BRI3BPQ8WY22 251 aa28.06■■■□□ 2.08
CDKN2A-208ENST00000498124 TMOD2Q9NZR1 351 aa28.06■■■□□ 2.08
CDKN2A-208ENST00000498124 SNCAIPQ9Y6H5 919 aa28.06■■■□□ 2.08
CDKN2A-208ENST00000498124 ZBTB22O15209 634 aa28.05■■■□□ 2.08
CDKN2A-208ENST00000498124 SALL1Q9NSC2 1324 aa28.05■■■□□ 2.08
CDKN2A-208ENST00000498124 HDAC5Q9UQL6 1122 aa28.05■■■□□ 2.08
CDKN2A-208ENST00000498124 TRIM27P14373 513 aa28.04■■■□□ 2.08
CDKN2A-208ENST00000498124 MTX1Q13505 466 aa28.04■■■□□ 2.08
CDKN2A-208ENST00000498124 SPDYE5A6NIY4 337 aa28.03■■■□□ 2.08
CDKN2A-208ENST00000498124 CSADQ9Y600 493 aa28.03■■■□□ 2.08
CDKN2A-208ENST00000498124 SEMA3EO15041 775 aa28.02■■■□□ 2.08
CDKN2A-208ENST00000498124 CAP1Q01518 475 aa28.02■■■□□ 2.08
CDKN2A-208ENST00000498124 OTUD7BQ6GQQ9 843 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms