RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MFAP1P55081 439 aaKnown RBP5.07□□□□□ -1.6
RIF1-212ENST00000498041 ZNF423Q2M1K9 1284 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 RPS26P11Q5JNZ5 115 aaPredicted RBP5.07□□□□□ -1.6
RIF1-212ENST00000498041 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 MCTP1Q6DN14 999 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 TMEM130Q8N3G9 435 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 DDX54Q8TDD1 881 aaKnown RBP5.07□□□□□ -1.6
RIF1-212ENST00000498041 MEGF10Q96KG7 1140 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
RIF1-212ENST00000498041 COBLO75128 1261 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 GNA15P30679 374 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 GSTT1P30711 240 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 DUOXA2Q1HG44 320 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 FBXO33Q7Z6M2 555 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 DUSP9Q99956 384 aaKnown RBP5.06□□□□□ -1.6
RIF1-212ENST00000498041 SSBP4Q9BWG4 385 aaPredicted RBP5.06□□□□□ -1.6
RIF1-212ENST00000498041 OSBPL7Q9BZF2 842 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 C12orf49Q9H741 205 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 KCNK4Q9NYG8 393 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 RNF112Q9ULX5 631 aa5.06□□□□□ -1.6
RIF1-212ENST00000498041 F8W735 103 aaPredicted RBP5.05□□□□□ -1.6
RIF1-212ENST00000498041 DDX3YO15523 660 aaKnown RBP5.05□□□□□ -1.6
RIF1-212ENST00000498041 ADAM11O75078 769 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 B3GALT4O96024 378 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 NLRP12P59046 1061 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 GSTM4Q03013 218 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 FOXD4L4Q8WXT5 416 aaPredicted RBP5.05□□□□□ -1.6
RIF1-212ENST00000498041 AKTIPQ9H8T0 292 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 FAM8A1Q9UBU6 413 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 AKAP2Q9Y2D5 859 aa5.05□□□□□ -1.6
RIF1-212ENST00000498041 PAX4O43316 350 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 WISP1O95388 367 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 EIF4BP23588 611 aaKnown RBP5.04□□□□□ -1.6
RIF1-212ENST00000498041 XPCQ01831 940 aaPredicted RBP5.04□□□□□ -1.6
RIF1-212ENST00000498041 PRR23CQ6ZRP0 262 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 ACAD11Q709F0 780 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.04□□□□□ -1.6
RIF1-212ENST00000498041 C3orf58Q8NDZ4 430 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 UBASH3BQ8TF42 649 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 BCL2L13Q9BXK5 485 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 PARP2Q9UGN5 583 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 PPM1HQ9ULR3 514 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 AK5Q9Y6K8 562 aa5.04□□□□□ -1.6
RIF1-212ENST00000498041 CYP11A1P05108 521 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 USP17L7P0C7H9 530 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 FSTP19883 344 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 IRAK1P51617 712 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 DAB2P98082 770 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 PPP2R3AQ06190 1150 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 FAAP100Q0VG06 881 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 PSMD2Q13200 908 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 ZNF326Q5BKZ1 582 aaKnown RBP5.03□□□□□ -1.6
RIF1-212ENST00000498041 KIAA1211Q6ZU35 1233 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 RUSC1Q9BVN2 902 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 USP26Q9BXU7 913 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 RNF19AQ9NV58 838 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 TMEM39AQ9NV64 488 aa5.03□□□□□ -1.6
RIF1-212ENST00000498041 GPN3Q9UHW5 284 aaPredicted RBP5.03□□□□□ -1.6
RIF1-212ENST00000498041 LOC100289279A0A1B0GTE1 492 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 MEGF11A6BM72 1044 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 GLB1P16278 677 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 ITGAEP38570 1179 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 ZNF157P51786 506 aaPredicted RBP5.02□□□□□ -1.61
RIF1-212ENST00000498041 TAGLNQ01995 201 aaKnown RBP5.02□□□□□ -1.61
RIF1-212ENST00000498041 AP3B2Q13367 1082 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 POU4F3Q15319 338 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 TMC4Q7Z404 712 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 AGGF1Q8N302 714 aaeCLIP5.02□□□□□ -1.61
RIF1-212ENST00000498041 ANKRD24Q8TF21 1146 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 TRIM56Q9BRZ2 755 aaKnown RBP5.02□□□□□ -1.61
RIF1-212ENST00000498041 CEP44Q9C0F1 390 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 NRSN2Q9GZP1 204 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 RNF208Q9H0X6 261 aa5.02□□□□□ -1.61
RIF1-212ENST00000498041 MAOBP27338 520 aa5.01□□□□□ -1.61
RIF1-212ENST00000498041 EXOSC6Q5RKV6 272 aaKnown RBP5.01□□□□□ -1.61
RIF1-212ENST00000498041 HP1BP3Q5SSJ5 553 aaPredicted RBP5.01□□□□□ -1.61
RIF1-212ENST00000498041 Q6ZS46 218 aa5.01□□□□□ -1.61
RIF1-212ENST00000498041 GIPC2Q8TF65 315 aa5.01□□□□□ -1.61
RIF1-212ENST00000498041 CORO1BQ9BR76 489 aa5.01□□□□□ -1.61
RIF1-212ENST00000498041 CEP41Q9BYV8 373 aa5.01□□□□□ -1.61
RIF1-212ENST00000498041 BCL11AQ9H165 835 aa5.01□□□□□ -1.61
RIF1-212ENST00000498041 SORBS3O60504 671 aa5□□□□□ -1.61
RIF1-212ENST00000498041 TXKP42681 527 aa5□□□□□ -1.61
RIF1-212ENST00000498041 NUTM2GQ5VZR2 741 aa5□□□□□ -1.61
RIF1-212ENST00000498041 ANKRD34AQ69YU3 496 aa5□□□□□ -1.61
RIF1-212ENST00000498041 TPTE2Q6XPS3 522 aa5□□□□□ -1.61
RIF1-212ENST00000498041 DZIP1LQ8IYY4 767 aaKnown RBP5□□□□□ -1.61
RIF1-212ENST00000498041 FAM161BQ96MY7 647 aa5□□□□□ -1.61
RIF1-212ENST00000498041 NECAB3Q96P71 396 aaPredicted RBP5□□□□□ -1.61
RIF1-212ENST00000498041 TMPRSS13Q9BYE2 586 aa5□□□□□ -1.61
RIF1-212ENST00000498041 MRS2Q9HD23 443 aa5□□□□□ -1.61
RIF1-212ENST00000498041 TTF2Q9UNY4 1162 aaKnown RBP5□□□□□ -1.61
RIF1-212ENST00000498041 FBXO24O75426 580 aa4.99□□□□□ -1.61
RIF1-212ENST00000498041 DLGAP3O95886 979 aa4.99□□□□□ -1.61
RIF1-212ENST00000498041 NME2P22392 152 aa4.99□□□□□ -1.61
RIF1-212ENST00000498041 FDX2Q6P4F2 183 aa4.99□□□□□ -1.61
RIF1-212ENST00000498041 SMG8Q8ND04 991 aaKnown RBP4.99□□□□□ -1.61
RIF1-212ENST00000498041 SUGCTQ9HAC7 445 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms