RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 MARCH6O60337 910 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 FGD1P98174 961 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 RGL4Q8IZJ4 473 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 RHBDD1Q8TEB9 315 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 ARMC5Q96C12 935 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 LNPKQ9C0E8 428 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 NLRP2Q9NX02 1062 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 SCHIP1Q9P0W5 487 aaPredicted RBP7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 BRPF3Q9ULD4 1205 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 LRP5O75197 1615 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 BTAF1O14981 1849 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 LY75O60449 1722 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 NSD2O96028 1365 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 ATP2B1P20020 1258 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 EPHA4P54764 986 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 FOXK2Q01167 660 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 ZNF211Q13398 564 aaPredicted RBP7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 CHRNA2Q15822 529 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 NBPF10Q6P3W6 841 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 NME9Q86XW9 330 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 TCP11L2Q8N4U5 519 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 DNAJC2Q99543 621 aaKnown RBP7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 ITGB4P16144 1822 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 NSD3Q9BZ95 1437 aa7.86□□□□□ -1.15
TMEM39A-212ENST00000497993 PARD3Q8TEW0 1356 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 TLDC2A0PJX2 215 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 PTSQ03393 145 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 POU4F2Q12837 409 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 NUTM2GQ5VZR2 741 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 KRT27Q7Z3Y8 459 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 TSEN2Q8NCE0 465 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 GAS2L2Q8NHY3 880 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 CARD10Q9BWT7 1032 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 NIFKQ9BYG3 293 aaKnown RBP7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 IQSEC3Q9UPP2 1182 aaPredicted RBP7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 COL24A1Q17RW2 1714 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 DOT1LQ8TEK3 1739 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 OVOS2A0A0G2JMS6 1433 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 PAPPAQ13219 1627 aa7.85□□□□□ -1.15
TMEM39A-212ENST00000497993 SLC35F4A4IF30 521 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 FYB1O15117 783 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 HSPA5P11021 654 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 SCNN1AP37088 669 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 GNL2Q13823 731 aaKnown RBP7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 C9orf131Q5VYM1 1079 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 ZNF662Q6ZS27 426 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 NPAS3Q8IXF0 933 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 CCSER2Q9H7U1 834 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 CXXC1Q9P0U4 656 aaPredicted RBP7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 PRKAG2Q9UGJ0 569 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 TAF1LQ8IZX4 1826 aa7.84□□□□□ -1.15
TMEM39A-212ENST00000497993 NPC1L1Q9UHC9 1359 aa7.84□□□□□ -1.16
TMEM39A-212ENST00000497993 ZNF831Q5JPB2 1677 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 PRMT3O60678 531 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 TMC1Q8TDI8 760 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 IP6K1Q92551 441 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 PSMD1Q99460 953 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 ANO2Q9NQ90 1003 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 NXF1Q9UBU9 619 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 TOGARAM1Q9Y4F4 1720 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 INSRP06213 1382 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 FLT4P35916 1363 aa7.83□□□□□ -1.16
TMEM39A-212ENST00000497993 MAP3K19Q56UN5 1328 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 CICQ96RK0 1608 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 CASZ1Q86V15 1759 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 RHOQP17081 205 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 FKBP4Q02790 459 aaKnown RBP eCLIP7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 RAD51AP2Q09MP3 1159 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 NT5DC4Q86YG4 428 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 SLC9A9Q8IVB4 645 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 ZNF295-AS1Q8N0V1 137 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 MICAL1Q8TDZ2 1067 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 METTL14Q9HCE5 456 aaKnown RBP7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 TIMMDC1Q9NPL8 285 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 CHMP3Q9Y3E7 222 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 TUBGCP6Q96RT7 1819 aa7.82□□□□□ -1.16
TMEM39A-212ENST00000497993 CGNL1Q0VF96 1302 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 SENP3-EIF4A1A0A087X0R7 540 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 A0A1B0GTH6 734 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 TEAD4Q15561 434 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 SOGA3Q5TF21 947 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 FAM196AQ6ZSG2 479 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 STAG2Q8N3U4 1231 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 CCDC155Q8N6L0 562 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 TMEM87AQ8NBN3 555 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 COG3Q96JB2 828 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 TINF2Q9BSI4 451 aa7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 TSPAN10Q9H1Z9 355 aaPredicted RBP7.81□□□□□ -1.16
TMEM39A-212ENST00000497993 MRS2Q9HD23 443 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms