RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
SMC4-227ENST00000497984 ZNF423Q2M1K9 1284 aa8.23□□□□□ -1.09
SMC4-227ENST00000497984 FBXL6Q8N531 539 aa8.23□□□□□ -1.09
SMC4-227ENST00000497984 FBLIM1Q8WUP2 373 aa8.23□□□□□ -1.09
SMC4-227ENST00000497984 CTSBP07858 339 aa8.22□□□□□ -1.09
SMC4-227ENST00000497984 SOX4Q06945 474 aaPredicted RBP8.22□□□□□ -1.09
SMC4-227ENST00000497984 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
SMC4-227ENST00000497984 SPRED3Q2MJR0 410 aa8.22□□□□□ -1.09
SMC4-227ENST00000497984 EZH1Q92800 747 aaPredicted RBP8.22□□□□□ -1.09
SMC4-227ENST00000497984 CLEC4MQ9H2X3 399 aaPredicted RBP8.22□□□□□ -1.09
SMC4-227ENST00000497984 ATG3Q9NT62 314 aa8.22□□□□□ -1.09
SMC4-227ENST00000497984 ICMTO60725 284 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 FOSL1P15407 271 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 ADMP35318 185 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 NFKBIBQ15653 356 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 CPSF6Q16630 551 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMC4-227ENST00000497984 GIMAP7Q8NHV1 300 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 EGFL7Q9UHF1 273 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 ADGRE2Q9UHX3 823 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 LEMD3Q9Y2U8 911 aa8.21□□□□□ -1.1
SMC4-227ENST00000497984 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
SMC4-227ENST00000497984 ADH5P11766 374 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 USP11P51784 963 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 PAOXQ6QHF9 649 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 GATA6Q92908 595 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 OSBPL1AQ9BXW6 950 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 LIN7BQ9HAP6 207 aa8.2□□□□□ -1.1
SMC4-227ENST00000497984 MAOBP27338 520 aa8.19□□□□□ -1.1
SMC4-227ENST00000497984 NFXL1Q6ZNB6 911 aa8.19□□□□□ -1.1
SMC4-227ENST00000497984 TRIM56Q9BRZ2 755 aaKnown RBP8.19□□□□□ -1.1
SMC4-227ENST00000497984 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
SMC4-227ENST00000497984 ACTL7BQ9Y614 415 aa8.19□□□□□ -1.1
SMC4-227ENST00000497984 TXKP42681 527 aa8.18□□□□□ -1.1
SMC4-227ENST00000497984 SERPINB4P48594 390 aa8.18□□□□□ -1.1
SMC4-227ENST00000497984 KIAA0319Q5VV43 1072 aa8.18□□□□□ -1.1
SMC4-227ENST00000497984 ZAR1Q86SH2 424 aa8.18□□□□□ -1.1
SMC4-227ENST00000497984 PRNPP04156 253 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 CYP11A1P05108 521 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 ARHGAP4P98171 946 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 POU4F3Q15319 338 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 ABI1Q8IZP0 508 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 TBC1D32Q96NH3 1257 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 METTL22Q9BUU2 404 aaPredicted RBP8.17□□□□□ -1.1
SMC4-227ENST00000497984 CCDC39Q9UFE4 941 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 USTQ9Y2C2 406 aa8.17□□□□□ -1.1
SMC4-227ENST00000497984 H3BRB1 525 aa8.16□□□□□ -1.1
SMC4-227ENST00000497984 ECEL1O95672 775 aa8.16□□□□□ -1.1
SMC4-227ENST00000497984 B3GALT4O96024 378 aa8.16□□□□□ -1.1
SMC4-227ENST00000497984 YIPF2Q9BWQ6 316 aa8.16□□□□□ -1.1
SMC4-227ENST00000497984 ZNF576Q9H609 170 aa8.16□□□□□ -1.1
SMC4-227ENST00000497984 TUT1Q9H6E5 874 aaKnown RBP8.16□□□□□ -1.1
SMC4-227ENST00000497984 BRPF3Q9ULD4 1205 aa8.16□□□□□ -1.1
SMC4-227ENST00000497984 FAM170BA6NMN3 283 aa8.15□□□□□ -1.1
SMC4-227ENST00000497984 ITPKAP23677 461 aa8.15□□□□□ -1.1
SMC4-227ENST00000497984 ORC1Q13415 861 aa8.15□□□□□ -1.1
SMC4-227ENST00000497984 FAM129BQ96TA1 746 aa8.15□□□□□ -1.1
SMC4-227ENST00000497984 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
SMC4-227ENST00000497984 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
SMC4-227ENST00000497984 CYP26A1O43174 497 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 NFICP08651 508 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 GLYCTKQ8IVS8 523 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 SEMA6CQ9H3T2 930 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 ACSS3Q9H6R3 686 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 NPHS2Q9NP85 383 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 FAM105AQ9NUU6 356 aa8.14□□□□□ -1.11
SMC4-227ENST00000497984 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
SMC4-227ENST00000497984 IGHA2P01877 340 aa8.13□□□□□ -1.11
SMC4-227ENST00000497984 YBX3P16989 372 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMC4-227ENST00000497984 RAB6AP20340 208 aa8.13□□□□□ -1.11
SMC4-227ENST00000497984 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
SMC4-227ENST00000497984 HP1BP3Q5SSJ5 553 aaPredicted RBP8.13□□□□□ -1.11
SMC4-227ENST00000497984 SEZ6L2Q6UXD5 910 aa8.13□□□□□ -1.11
SMC4-227ENST00000497984 DYMQ7RTS9 669 aa8.13□□□□□ -1.11
SMC4-227ENST00000497984 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
SMC4-227ENST00000497984 ANGEL1Q9UNK9 670 aaKnown RBP8.13□□□□□ -1.11
SMC4-227ENST00000497984 CPNE3O75131 537 aaKnown RBP8.12□□□□□ -1.11
SMC4-227ENST00000497984 NEFLP07196 543 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 MAP7Q14244 749 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 B4GALNT3Q6L9W6 998 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 CBLL1Q75N03 491 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 CORO1BQ9BR76 489 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 EHD4Q9H223 541 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 ZFYVE1Q9HBF4 777 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 ABCB6Q9NP58 842 aa8.12□□□□□ -1.11
SMC4-227ENST00000497984 NDUFB5O43674 189 aa8.11□□□□□ -1.11
SMC4-227ENST00000497984 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
SMC4-227ENST00000497984 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
SMC4-227ENST00000497984 WDR18Q9BV38 432 aa8.11□□□□□ -1.11
SMC4-227ENST00000497984 BSDC1Q9NW68 430 aaPredicted RBP8.11□□□□□ -1.11
SMC4-227ENST00000497984 AP4E1Q9UPM8 1137 aa8.11□□□□□ -1.11
SMC4-227ENST00000497984 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 GPR182O15218 404 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 DYNC1LI2O43237 492 aaPredicted RBP8.1□□□□□ -1.11
SMC4-227ENST00000497984 AOC2O75106 756 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 ASPAP45381 313 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
SMC4-227ENST00000497984 ZNF765Q7L2R6 523 aa8.1□□□□□ -1.11
SMC4-227ENST00000497984 DDX54Q8TDD1 881 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms