RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CAVIN4Q5BKX8 364 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 TTLL5Q6EMB2 1281 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 FBXO33Q7Z6M2 555 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 TDRD7Q8NHU6 1098 aaKnown RBP13.93□□□□□ -0.18
ERCC8-208ENST00000497892 TRPM4Q8TD43 1214 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
ERCC8-208ENST00000497892 FAM205AQ6ZU69 1335 aa13.92□□□□□ -0.18
ERCC8-208ENST00000497892 SASH1O94885 1247 aa13.92□□□□□ -0.18
ERCC8-208ENST00000497892 USP17L8P0C7I0 530 aa13.92□□□□□ -0.18
ERCC8-208ENST00000497892 ZNF280AP59817 542 aaPredicted RBP13.92□□□□□ -0.18
ERCC8-208ENST00000497892 TFCP2Q12800 502 aa13.92□□□□□ -0.18
ERCC8-208ENST00000497892 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
ERCC8-208ENST00000497892 EGFRP00533 1210 aa13.91□□□□□ -0.18
ERCC8-208ENST00000497892 HSPA6P17066 643 aa13.91□□□□□ -0.18
ERCC8-208ENST00000497892 HIRAP54198 1017 aaPredicted RBP13.91□□□□□ -0.18
ERCC8-208ENST00000497892 FKBP1AP62942 108 aaKnown RBP13.91□□□□□ -0.18
ERCC8-208ENST00000497892 G3BP1Q13283 466 aaKnown RBP eCLIP13.91□□□□□ -0.18
ERCC8-208ENST00000497892 SAMD7Q7Z3H4 446 aa13.91□□□□□ -0.18
ERCC8-208ENST00000497892 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
ERCC8-208ENST00000497892 CERS5Q8N5B7 392 aa13.91□□□□□ -0.18
ERCC8-208ENST00000497892 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
ERCC8-208ENST00000497892 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
ERCC8-208ENST00000497892 SURF6O75683 361 aaKnown RBP13.9□□□□□ -0.18
ERCC8-208ENST00000497892 BCAMP50895 628 aa13.9□□□□□ -0.18
ERCC8-208ENST00000497892 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
ERCC8-208ENST00000497892 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
ERCC8-208ENST00000497892 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
ERCC8-208ENST00000497892 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.18
ERCC8-208ENST00000497892 PGAP2Q9UHJ9 254 aa13.9□□□□□ -0.18
ERCC8-208ENST00000497892 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
ERCC8-208ENST00000497892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
ERCC8-208ENST00000497892 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
ERCC8-208ENST00000497892 ECM29Q5VYK3 1845 aa13.9□□□□□ -0.18
ERCC8-208ENST00000497892 PASKQ96RG2 1323 aa13.9□□□□□ -0.19
ERCC8-208ENST00000497892 A0A1B0GUL7 405 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 ITGBL1O95965 494 aaPredicted RBP13.89□□□□□ -0.19
ERCC8-208ENST00000497892 MMP14P50281 582 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
ERCC8-208ENST00000497892 KIAA0825Q8IV33 1275 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 MYOZ2Q9NPC6 264 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 IQSEC3Q9UPP2 1182 aaPredicted RBP13.89□□□□□ -0.19
ERCC8-208ENST00000497892 JAG2Q9Y219 1238 aa13.89□□□□□ -0.19
ERCC8-208ENST00000497892 HMMRO75330 724 aa13.88□□□□□ -0.19
ERCC8-208ENST00000497892 ADORA1P30542 326 aa13.88□□□□□ -0.19
ERCC8-208ENST00000497892 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
ERCC8-208ENST00000497892 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
ERCC8-208ENST00000497892 CNTROBQ8N137 903 aa13.88□□□□□ -0.19
ERCC8-208ENST00000497892 GPR108Q9NPR9 543 aa13.88□□□□□ -0.19
ERCC8-208ENST00000497892 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
ERCC8-208ENST00000497892 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
ERCC8-208ENST00000497892 SEMA3EO15041 775 aa13.87□□□□□ -0.19
ERCC8-208ENST00000497892 PHKA1P46020 1223 aa13.87□□□□□ -0.19
ERCC8-208ENST00000497892 TIMM10P62072 90 aa13.87□□□□□ -0.19
ERCC8-208ENST00000497892 RBM26Q5T8P6 1007 aaKnown RBP13.87□□□□□ -0.19
ERCC8-208ENST00000497892 CCDC102BQ68D86 513 aa13.87□□□□□ -0.19
ERCC8-208ENST00000497892 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
ERCC8-208ENST00000497892 POLR2AP24928 1970 aaKnown RBP13.86□□□□□ -0.19
ERCC8-208ENST00000497892 FRAT2O75474 233 aaPredicted RBP13.86□□□□□ -0.19
ERCC8-208ENST00000497892 APLP1P51693 650 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 CHAF1AQ13111 956 aaPredicted RBP13.86□□□□□ -0.19
ERCC8-208ENST00000497892 TNNI3KQ59H18 835 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 ERC1Q8IUD2 1116 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 TBC1D22AQ8WUA7 517 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 GNL3LQ9NVN8 582 aaKnown RBP13.86□□□□□ -0.19
ERCC8-208ENST00000497892 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 FPGT-TNNI3KV9GXZ4 949 aa13.86□□□□□ -0.19
ERCC8-208ENST00000497892 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
ERCC8-208ENST00000497892 HSP90AB4PQ58FF6 505 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 ZBED3Q96IU2 234 aaPredicted RBP13.85□□□□□ -0.19
ERCC8-208ENST00000497892 NEUROD6Q96NK8 337 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 HS3ST6Q96QI5 342 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 GGA3Q9NZ52 723 aa13.85□□□□□ -0.19
ERCC8-208ENST00000497892 ASTN2O75129 1339 aaPredicted RBP13.85□□□□□ -0.19
ERCC8-208ENST00000497892 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
ERCC8-208ENST00000497892 F8W031 263 aaPredicted RBP13.84□□□□□ -0.19
ERCC8-208ENST00000497892 WNT10BO00744 389 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 SCARF1Q14162 830 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 NBPF9Q3BBW0 867 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 MTMR14Q8NCE2 650 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 WDR66Q8TBY9 1149 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 CRBNQ96SW2 442 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 GLIS2Q9BZE0 524 aaPredicted RBP13.84□□□□□ -0.19
ERCC8-208ENST00000497892 DENND2AQ9ULE3 1009 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 TTF2Q9UNY4 1162 aaKnown RBP13.84□□□□□ -0.19
ERCC8-208ENST00000497892 SUGT1Q9Y2Z0 365 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 PITPNM2Q9BZ72 1349 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 SALL1Q9NSC2 1324 aa13.84□□□□□ -0.19
ERCC8-208ENST00000497892 TRAF5O00463 557 aa13.83□□□□□ -0.2
ERCC8-208ENST00000497892 GRIK5Q16478 980 aa13.83□□□□□ -0.2
ERCC8-208ENST00000497892 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
ERCC8-208ENST00000497892 CDC37L1Q7L3B6 337 aa13.83□□□□□ -0.2
ERCC8-208ENST00000497892 DCPSQ96C86 337 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms