RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	CA12	O43570	354 aa		18.15	■□□□□ 0.5
IVD-209	ENST00000497816	HDLBP	Q00341	1268 aa	Known RBP	18.15	■□□□□ 0.5
IVD-209	ENST00000497816	KIF23	Q02241	960 aa	Predicted RBP	18.15	■□□□□ 0.5
IVD-209	ENST00000497816	DZIP1L	Q8IYY4	767 aa	Known RBP	18.15	■□□□□ 0.5
IVD-209	ENST00000497816	VEZT	Q9HBM0	779 aa		18.15	■□□□□ 0.5
IVD-209	ENST00000497816	TSKS	Q9UJT2	592 aa		18.15	■□□□□ 0.5
IVD-209	ENST00000497816	PNMA6E	A0A0J9YXQ4	647 aa		18.14	■□□□□ 0.49
IVD-209	ENST00000497816	RLBP1	P12271	317 aa		18.14	■□□□□ 0.49
IVD-209	ENST00000497816	TTLL12	Q14166	644 aa	Predicted RBP	18.14	■□□□□ 0.49
IVD-209	ENST00000497816	TDRD3	Q9H7E2	651 aa	Known RBP	18.14	■□□□□ 0.49
IVD-209	ENST00000497816	ZNF70	Q9UC06	446 aa	Predicted RBP	18.14	■□□□□ 0.49
IVD-209	ENST00000497816	SUGT1	Q9Y2Z0	365 aa		18.14	■□□□□ 0.49
IVD-209	ENST00000497816	MYH2	Q9UKX2	1941 aa		18.14	■□□□□ 0.49
IVD-209	ENST00000497816	ADORA1	P30542	326 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	PHKA1	P46020	1223 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	PRKG1	Q13976	671 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	RASA3	Q14644	834 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	LDLRAD1	Q5T700	205 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	ARMC9	Q7Z3E5	817 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	WDR66	Q8TBY9	1149 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	TEKT1	Q969V4	418 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	CSRNP1	Q96S65	589 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	MRI	Q9BWK5	157 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	FZD1	Q9UP38	647 aa		18.13	■□□□□ 0.49
IVD-209	ENST00000497816	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.13	■□□□□ 0.49
IVD-209	ENST00000497816	MAST3	O60307	1309 aa		18.12	■□□□□ 0.49
IVD-209	ENST00000497816	ZBTB22	O15209	634 aa		18.12	■□□□□ 0.49
IVD-209	ENST00000497816	MAP3K11	Q16584	847 aa		18.12	■□□□□ 0.49
IVD-209	ENST00000497816	FTSJ3	Q8IY81	847 aa	Known RBP	18.12	■□□□□ 0.49
IVD-209	ENST00000497816	ZDHHC15	Q96MV8	337 aa		18.12	■□□□□ 0.49
IVD-209	ENST00000497816	ANGEL1	Q9UNK9	670 aa	Known RBP	18.12	■□□□□ 0.49
IVD-209	ENST00000497816	TIMM10	P62072	90 aa		18.11	■□□□□ 0.49
IVD-209	ENST00000497816	TFCP2	Q12800	502 aa		18.11	■□□□□ 0.49
IVD-209	ENST00000497816	TNFAIP1	Q13829	316 aa		18.11	■□□□□ 0.49
IVD-209	ENST00000497816	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.11	■□□□□ 0.49
IVD-209	ENST00000497816	GNL3L	Q9NVN8	582 aa	Known RBP	18.11	■□□□□ 0.49
IVD-209	ENST00000497816	SEMA3E	O15041	775 aa		18.1	■□□□□ 0.49
IVD-209	ENST00000497816	SUPT20HL1	Q3ZLR7	823 aa		18.1	■□□□□ 0.49
IVD-209	ENST00000497816	CCDC102B	Q68D86	513 aa		18.1	■□□□□ 0.49
IVD-209	ENST00000497816	ITPRIP	Q8IWB1	547 aa		18.1	■□□□□ 0.49
IVD-209	ENST00000497816	SAGE1	Q9NXZ1	904 aa		18.1	■□□□□ 0.49
IVD-209	ENST00000497816	SALL1	Q9NSC2	1324 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816		A0A1B0GUL7	405 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	POLA2	Q14181	598 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.09	■□□□□ 0.49
IVD-209	ENST00000497816	HHIPL2	Q6UWX4	724 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	REM2	Q8IYK8	340 aa	Predicted RBP	18.09	■□□□□ 0.49
IVD-209	ENST00000497816	TEPSIN	Q96N21	525 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	DENND2A	Q9ULE3	1009 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	AKAP2	Q9Y2D5	859 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	AK9	Q5TCS8	1911 aa		18.09	■□□□□ 0.49
IVD-209	ENST00000497816	TCP10L2	B9ZVM9	353 aa		18.08	■□□□□ 0.49
IVD-209	ENST00000497816	ZBTB7B	O15156	539 aa	Predicted RBP	18.08	■□□□□ 0.49
IVD-209	ENST00000497816	PPP1R12B	O60237	982 aa	Predicted RBP	18.08	■□□□□ 0.49
IVD-209	ENST00000497816	PRDX5	P30044	214 aa		18.08	■□□□□ 0.49
IVD-209	ENST00000497816	CDAN1	Q8IWY9	1227 aa		18.08	■□□□□ 0.49
IVD-209	ENST00000497816	XAGE2	Q96GT9	111 aa		18.08	■□□□□ 0.49
IVD-209	ENST00000497816	C1orf115	Q9H7X2	142 aa		18.08	■□□□□ 0.49
IVD-209	ENST00000497816	RNF186	Q9NXI6	227 aa		18.08	■□□□□ 0.49
IVD-209	ENST00000497816	PDS5A	Q29RF7	1337 aa	Known RBP	18.08	■□□□□ 0.48
IVD-209	ENST00000497816	SSH3	Q8TE77	659 aa		18.08	■□□□□ 0.48
IVD-209	ENST00000497816	TMEM39B	Q9GZU3	492 aa		18.08	■□□□□ 0.48
IVD-209	ENST00000497816	USP2	O75604	605 aa	Predicted RBP	18.07	■□□□□ 0.48
IVD-209	ENST00000497816	TNNI2	P48788	182 aa		18.07	■□□□□ 0.48
IVD-209	ENST00000497816	CACNB3	P54284	484 aa		18.07	■□□□□ 0.48
IVD-209	ENST00000497816	ATP8B2	P98198	1209 aa		18.07	■□□□□ 0.48
IVD-209	ENST00000497816	RASGRF1	Q13972	1273 aa		18.07	■□□□□ 0.48
IVD-209	ENST00000497816	CLMN	Q96JQ2	1002 aa		18.07	■□□□□ 0.48
IVD-209	ENST00000497816	UNCX	A6NJT0	531 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	TRPA1	O75762	1119 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.06	■□□□□ 0.48
IVD-209	ENST00000497816	MVP	Q14764	893 aa	Known RBP	18.06	■□□□□ 0.48
IVD-209	ENST00000497816	DIXDC1	Q155Q3	683 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	FKBP1C	Q5VVH2	108 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	SPRYD7	Q5W111	196 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	PANK1	Q8TE04	598 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	DAGLA	Q9Y4D2	1042 aa		18.06	■□□□□ 0.48
IVD-209	ENST00000497816	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.06	■□□□□ 0.48
IVD-209	ENST00000497816	LDHB	P07195	334 aa	Known RBP	18.05	■□□□□ 0.48
IVD-209	ENST00000497816	IREB2	P48200	963 aa	Known RBP	18.05	■□□□□ 0.48
IVD-209	ENST00000497816	MKRN3	Q13064	507 aa	Known RBP	18.05	■□□□□ 0.48
IVD-209	ENST00000497816	DOCK2	Q92608	1830 aa		18.04	■□□□□ 0.48
IVD-209	ENST00000497816	TM4SF4	P48230	202 aa		18.04	■□□□□ 0.48
IVD-209	ENST00000497816	FAM83A	Q86UY5	434 aa		18.04	■□□□□ 0.48
IVD-209	ENST00000497816	SLC10A4	Q96EP9	437 aa		18.04	■□□□□ 0.48
IVD-209	ENST00000497816	NEUROD6	Q96NK8	337 aa		18.04	■□□□□ 0.48
IVD-209	ENST00000497816	TMOD2	Q9NZR1	351 aa		18.04	■□□□□ 0.48
IVD-209	ENST00000497816	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.04	■□□□□ 0.48
IVD-209	ENST00000497816	CAPN15	O75808	1086 aa		18.03	■□□□□ 0.48
IVD-209	ENST00000497816	ZGPAT	Q8N5A5	531 aa	Known RBP	18.03	■□□□□ 0.48
IVD-209	ENST00000497816	WNK4	Q96J92	1243 aa		18.03	■□□□□ 0.48
IVD-209	ENST00000497816	ANKRD13A	Q8IZ07	590 aa		18.03	■□□□□ 0.48
IVD-209	ENST00000497816	NOP58	Q9Y2X3	529 aa	Known RBP	18.03	■□□□□ 0.48
IVD-209	ENST00000497816	MAST2	Q6P0Q8	1798 aa		18.02	■□□□□ 0.48
IVD-209	ENST00000497816	ZBTB48	P10074	688 aa	Predicted RBP	18.02	■□□□□ 0.47
IVD-209	ENST00000497816	ARID4A	P29374	1257 aa	Predicted RBP	18.02	■□□□□ 0.47
IVD-209	ENST00000497816	SREBF2	Q12772	1141 aa		18.02	■□□□□ 0.47
IVD-209	ENST00000497816	CDC42EP5	Q6NZY7	148 aa		18.02	■□□□□ 0.47
IVD-209	ENST00000497816	CEP85	Q6P2H3	762 aa		18.02	■□□□□ 0.47
IVD-209	ENST00000497816	GPR108	Q9NPR9	543 aa		18.02	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms